Analysis of interatomic Contacts of Structural Units in PDB entry:
7TQX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TQX entry

There are 3 chains in PDB entry 7TQX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 440
B
 MET 1THR 429
K
 LYS 22LYS 432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 7TQX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 29Right-handed alpha
Helix 2
AA2
A
36 42Right-handed alpha
Helix 3
AA3
A
72 81Right-handed alpha
Helix 4
AA4
A
82 85Right-handed 310
Helix 5
AA5
A
102 108Right-handed alpha
Helix 6
AA6
A
110 113Right-handed 310
Helix 7
AA7
A
114 128Right-handed alpha
Helix 8
AA8
A
143 161Right-handed alpha
Helix 9
AA9
A
182 190Right-handed alpha
Helix 10
AB1
A
190 197Right-handed alpha
Helix 11
AB2
A
205 216Right-handed alpha
Helix 12
AB3
A
223 240Right-handed alpha
Helix 13
AB4
A
241 243Right-handed 310
Helix 14
AB5
A
251 260Right-handed alpha
Helix 15
AB6
A
277 282Right-handed alpha
Helix 16
AB7
A
287 296Right-handed alpha
Helix 17
AB8
A
297 301Right-handed 310
Helix 18
AB9
A
306 310Right-handed 310
Helix 19
AC1
A
324 338Right-handed alpha
Helix 20
AC2
A
383 400Right-handed alpha
Helix 21
AC3
A
404 410Right-handed alpha
Helix 22
AC4
A
414 436Right-handed alpha
Helix 23
AC5
B
10 29Right-handed alpha
Helix 24
AC6
B
41 46Right-handed alpha
Helix 25
AC7
B
47 49Right-handed 310
Helix 26
AC8
B
70 79Right-handed alpha
Helix 27
AC9
B
81 85Right-handed 310
Helix 28
AD1
B
86 88Right-handed 310
Helix 29
AD2
B
100 106Right-handed alpha
Helix 30
AD3
B
107 126Right-handed alpha
Helix 31
AD4
B
142 159Right-handed alpha
Helix 32
AD5
B
180 193Right-handed alpha
Helix 33
AD6
B
204 214Right-handed alpha
Helix 34
AD7
B
221 237Right-handed alpha
Helix 35
AD8
B
249 258Right-handed alpha
Helix 36
AD9
B
275 282Right-handed 310
Helix 37
AE1
B
285 294Right-handed alpha
Helix 38
AE2
B
295 299Right-handed 310
Helix 39
AE3
B
304 308Right-handed 310
Helix 40
AE4
B
322 337Right-handed alpha
Helix 41
AE5
B
338 341Right-handed 310
Helix 42
AE6
B
374 390Right-handed alpha
Helix 43
AE7
B
395 400Right-handed alpha
Helix 44
AE8
B
404 425Right-handed alpha
Helix 45
AE9
K
36 44Right-handed alpha
Helix 46
AF1
K
124 132Right-handed alpha
Helix 47
AF2
K
157 166Right-handed alpha
Helix 48
AF3
K
166 176Right-handed alpha
Helix 49
AF4
K
190 196Right-handed alpha
Helix 50
AF5
K
203 219Right-handed alpha
Helix 51
AF6
K
274 288Right-handed alpha
Helix 52
AF7
K
347 372Right-handed alpha
Helix 53
AF8
K
373 378Right-handed 310
Helix 54
AF9
K
380 383Right-handed 310
Helix 55
AG1
K
384 390Right-handed alpha
Helix 56
AG2
K
409 411Right-handed 310
Helix 57
AG3
K
412 425Right-handed alpha
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There are 7 sheets in PDB entry 7TQX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
A
65 69parallel
Strand 3
A
4 9parallel
Strand 4
A
134 140parallel
Strand 5
A
165 171parallel
Strand 6
A
200 204parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
61 63anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 272first strand
Strand 2
A
373 381anti-parallel
Strand 3
A
312 321anti-parallel
Strand 4
A
351 356parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 92first strand
Strand 2
B
63 67parallel
Strand 3
B
3 9parallel
Strand 4
B
130 138parallel
Strand 5
B
163 170parallel
Strand 6
B
199 203parallel
Strand 7
B
265 270parallel
Strand 8
B
364 371anti-parallel
Strand 9
B
310 318anti-parallel
Strand 10
B
349 354parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 54first strand
Strand 2
B
58 61anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
150 152first strand
Strand 2
K
27 32parallel
Strand 3
K
399 406parallel
Strand 4
K
179 185parallel
Strand 5
K
325 333parallel
Strand 6
K
304 314anti-parallel
Strand 7
K
224 235anti-parallel
Strand 8
K
238 241anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
106 110first strand
Strand 2
K
113 116anti-parallel
Strand 3
K
144 146anti-parallel
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