Analysis of interatomic Contacts of Structural Units in PDB entry:
7TQY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TQY entry

There are 3 chains in PDB entry 7TQY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
K
 LYS 22ASN 439
A
 MET 1GLU 441
B
 MET 1THR 429
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 7TQY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
K
36 48Right-handed alpha
Helix 2
AA2
K
122 130Right-handed alpha
Helix 3
AA3
K
157 166Right-handed alpha
Helix 4
AA4
K
166 176Right-handed alpha
Helix 5
AA5
K
190 196Right-handed alpha
Helix 6
AA6
K
203 219Right-handed alpha
Helix 7
AA7
K
248 252Right-handed 310
Helix 8
AA8
K
274 288Right-handed alpha
Helix 9
AA9
K
347 372Right-handed alpha
Helix 10
AB1
K
373 376Right-handed 310
Helix 11
AB2
K
380 383Right-handed 310
Helix 12
AB3
K
384 390Right-handed alpha
Helix 13
AB4
K
390 396Right-handed alpha
Helix 14
AB5
K
409 411Right-handed 310
Helix 15
AB6
K
412 427Right-handed alpha
Helix 16
AB7
A
10 29Right-handed alpha
Helix 17
AB8
A
36 41Right-handed 310
Helix 18
AB9
A
71 80Right-handed alpha
Helix 19
AC1
A
102 108Right-handed alpha
Helix 20
AC2
A
114 128Right-handed alpha
Helix 21
AC3
A
144 161Right-handed alpha
Helix 22
AC4
A
182 195Right-handed alpha
Helix 23
AC5
A
206 216Right-handed alpha
Helix 24
AC6
A
223 240Right-handed alpha
Helix 25
AC7
A
241 243Right-handed 310
Helix 26
AC8
A
251 260Right-handed alpha
Helix 27
AC9
A
277 282Right-handed alpha
Helix 28
AD1
A
287 296Right-handed alpha
Helix 29
AD2
A
297 301Right-handed 310
Helix 30
AD3
A
306 310Right-handed 310
Helix 31
AD4
A
324 337Right-handed alpha
Helix 32
AD5
A
383 400Right-handed alpha
Helix 33
AD6
A
405 410Right-handed alpha
Helix 34
AD7
A
414 436Right-handed alpha
Helix 35
AD8
B
10 28Right-handed alpha
Helix 36
AD9
B
40 44Right-handed 310
Helix 37
AE1
B
46 49Right-handed 310
Helix 38
AE2
B
69 79Right-handed alpha
Helix 39
AE3
B
86 88Right-handed 310
Helix 40
AE4
B
100 106Right-handed alpha
Helix 41
AE5
B
108 125Right-handed alpha
Helix 42
AE6
B
141 159Right-handed alpha
Helix 43
AE7
B
180 194Right-handed alpha
Helix 44
AE8
B
203 214Right-handed alpha
Helix 45
AE9
B
221 237Right-handed alpha
Helix 46
AF1
B
237 242Right-handed alpha
Helix 47
AF2
B
249 258Right-handed alpha
Helix 48
AF3
B
277 282Right-handed 310
Helix 49
AF4
B
285 294Right-handed alpha
Helix 50
AF5
B
295 299Right-handed 310
Helix 51
AF6
B
304 308Right-handed 310
Helix 52
AF7
B
322 337Right-handed alpha
Helix 53
AF8
B
338 341Right-handed 310
Helix 54
AF9
B
374 390Right-handed alpha
Helix 55
AG1
B
395 400Right-handed alpha
Helix 56
AG2
B
404 427Right-handed alpha
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There are 10 sheets in PDB entry 7TQY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
24 25first strand
Strand 2
K
430 431anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
150 152first strand
Strand 2
K
27 32parallel
Strand 3
K
399 406parallel
Strand 4
K
179 185parallel
Strand 5
K
325 333parallel
Strand 6
K
304 315anti-parallel
Strand 7
K
223 235anti-parallel
Strand 8
K
238 241anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
106 110first strand
Strand 2
K
113 116anti-parallel
Strand 3
K
144 147anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
197 198first strand
Strand 2
K
201 202anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
291 292first strand
Strand 2
K
300 301anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 68first strand
Strand 2
A
3 9parallel
Strand 3
A
132 140parallel
Strand 4
A
165 172parallel
Strand 5
A
200 205parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
61 63anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 272first strand
Strand 2
A
373 381anti-parallel
Strand 3
A
312 321anti-parallel
Strand 4
A
351 356parallel
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There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 92first strand
Strand 2
B
63 67parallel
Strand 3
B
2 9parallel
Strand 4
B
129 138parallel
Strand 5
B
163 169parallel
Strand 6
B
198 202parallel
Strand 7
B
265 271parallel
Strand 8
B
364 371anti-parallel
Strand 9
B
310 318anti-parallel
Strand 10
B
349 354parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 53first strand
Strand 2
B
59 61anti-parallel
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