Analysis of interatomic Contacts of Structural Units in PDB entry:
7TQZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TQZ entry

There are 3 chains in PDB entry 7TQZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 440
B	MET 1	THR 429
K	LYS 22	LYS 432

There are 54 helices in PDB entry 7TQZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	29	Right-handed alpha
Helix 2	AA2	A	36	42	Right-handed alpha
Helix 3	AA3	A	72	80	Right-handed alpha
Helix 4	AA4	A	102	108	Right-handed alpha
Helix 5	AA5	A	110	113	Right-handed 310
Helix 6	AA6	A	114	129	Right-handed alpha
Helix 7	AA7	A	144	161	Right-handed alpha
Helix 8	AA8	A	182	190	Right-handed alpha
Helix 9	AA9	A	190	197	Right-handed alpha
Helix 10	AB1	A	206	216	Right-handed alpha
Helix 11	AB2	A	223	244	Right-handed alpha
Helix 12	AB3	A	251	260	Right-handed alpha
Helix 13	AB4	A	277	282	Right-handed alpha
Helix 14	AB5	A	287	296	Right-handed alpha
Helix 15	AB6	A	306	310	Right-handed 310
Helix 16	AB7	A	324	338	Right-handed alpha
Helix 17	AB8	A	383	400	Right-handed alpha
Helix 18	AB9	A	404	410	Right-handed alpha
Helix 19	AC1	A	415	435	Right-handed alpha
Helix 20	AC2	B	10	28	Right-handed alpha
Helix 21	AC3	B	41	46	Right-handed alpha
Helix 22	AC4	B	47	49	Right-handed 310
Helix 23	AC5	B	70	78	Right-handed alpha
Helix 24	AC6	B	81	85	Right-handed 310
Helix 25	AC7	B	86	90	Right-handed 310
Helix 26	AC8	B	100	106	Right-handed alpha
Helix 27	AC9	B	108	126	Right-handed alpha
Helix 28	AD1	B	142	159	Right-handed alpha
Helix 29	AD2	B	180	196	Right-handed alpha
Helix 30	AD3	B	204	214	Right-handed alpha
Helix 31	AD4	B	221	237	Right-handed alpha
Helix 32	AD5	B	237	242	Right-handed alpha
Helix 33	AD6	B	249	258	Right-handed alpha
Helix 34	AD7	B	285	295	Right-handed alpha
Helix 35	AD8	B	296	299	Right-handed 310
Helix 36	AD9	B	304	308	Right-handed 310
Helix 37	AE1	B	322	337	Right-handed alpha
Helix 38	AE2	B	338	341	Right-handed 310
Helix 39	AE3	B	373	390	Right-handed alpha
Helix 40	AE4	B	395	400	Right-handed alpha
Helix 41	AE5	B	404	427	Right-handed alpha
Helix 42	AE6	K	36	48	Right-handed alpha
Helix 43	AE7	K	124	129	Right-handed alpha
Helix 44	AE8	K	157	164	Right-handed alpha
Helix 45	AE9	K	166	176	Right-handed alpha
Helix 46	AF1	K	190	196	Right-handed alpha
Helix 47	AF2	K	203	219	Right-handed alpha
Helix 48	AF3	K	274	288	Right-handed alpha
Helix 49	AF4	K	339	343	Right-handed 310
Helix 50	AF5	K	347	372	Right-handed alpha
Helix 51	AF6	K	373	378	Right-handed 310
Helix 52	AF7	K	380	383	Right-handed 310
Helix 53	AF8	K	384	390	Right-handed alpha
Helix 54	AF9	K	412	426	Right-handed alpha

There are 8 sheets in PDB entry 7TQZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	93	first strand
Strand 2	A	65	69	parallel
Strand 3	A	2	9	parallel
Strand 4	A	131	140	parallel
Strand 5	A	165	172	parallel
Strand 6	A	200	205	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	55	first strand
Strand 2	A	61	63	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	272	first strand
Strand 2	A	373	381	anti-parallel
Strand 3	A	312	321	anti-parallel
Strand 4	A	351	356	parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	66	first strand
Strand 2	B	3	9	parallel
Strand 3	B	130	138	parallel
Strand 4	B	163	170	parallel
Strand 5	B	199	203	parallel
Strand 6	B	265	270	parallel
Strand 7	B	364	371	anti-parallel
Strand 8	B	310	318	anti-parallel
Strand 9	B	349	354	parallel
Strand 10	B	244	246	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	54	first strand
Strand 2	B	58	61	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	150	152	first strand
Strand 2	K	26	32	parallel
Strand 3	K	399	406	parallel
Strand 4	K	179	184	parallel
Strand 5	K	325	334	parallel
Strand 6	K	304	315	anti-parallel
Strand 7	K	223	235	anti-parallel
Strand 8	K	238	241	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	106	110	first strand
Strand 2	K	113	116	anti-parallel
Strand 3	K	144	147	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	291	294	first strand
Strand 2	K	297	301	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TQZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TQZ