Analysis of interatomic Contacts of Structural Units in PDB entry:
7TR3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TR3 entry

There are 3 chains in PDB entry 7TR3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 440
B
 MET 1ALA 430
K
 LYS 22ASN 439
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 7TR3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 28Right-handed alpha
Helix 2
AA2
A
38 43Right-handed alpha
Helix 3
AA3
A
48 52Right-handed 310
Helix 4
AA4
A
71 80Right-handed alpha
Helix 5
AA5
A
102 108Right-handed alpha
Helix 6
AA6
A
110 113Right-handed 310
Helix 7
AA7
A
114 128Right-handed alpha
Helix 8
AA8
A
144 162Right-handed alpha
Helix 9
AA9
A
182 195Right-handed alpha
Helix 10
AB1
A
205 216Right-handed alpha
Helix 11
AB2
A
223 240Right-handed alpha
Helix 12
AB3
A
251 260Right-handed alpha
Helix 13
AB4
A
287 295Right-handed alpha
Helix 14
AB5
A
297 301Right-handed 310
Helix 15
AB6
A
324 337Right-handed alpha
Helix 16
AB7
A
384 398Right-handed alpha
Helix 17
AB8
A
404 410Right-handed alpha
Helix 18
AB9
A
415 436Right-handed alpha
Helix 19
AC1
B
10 28Right-handed alpha
Helix 20
AC2
B
42 50Right-handed 310
Helix 21
AC3
B
54 58Right-handed 310
Helix 22
AC4
B
70 78Right-handed alpha
Helix 23
AC5
B
86 88Right-handed 310
Helix 24
AC6
B
100 106Right-handed alpha
Helix 25
AC7
B
108 125Right-handed alpha
Helix 26
AC8
B
141 159Right-handed alpha
Helix 27
AC9
B
180 190Right-handed alpha
Helix 28
AD1
B
204 214Right-handed alpha
Helix 29
AD2
B
221 237Right-handed alpha
Helix 30
AD3
B
237 242Right-handed alpha
Helix 31
AD4
B
249 257Right-handed alpha
Helix 32
AD5
B
285 295Right-handed alpha
Helix 33
AD6
B
296 299Right-handed 310
Helix 34
AD7
B
322 337Right-handed alpha
Helix 35
AD8
B
374 382Right-handed alpha
Helix 36
AD9
B
385 391Right-handed alpha
Helix 37
AE1
B
395 400Right-handed alpha
Helix 38
AE2
B
405 425Right-handed alpha
Helix 39
AE3
K
36 54Right-handed alpha
Helix 40
AE4
K
122 128Right-handed alpha
Helix 41
AE5
K
157 166Right-handed alpha
Helix 42
AE6
K
166 174Right-handed alpha
Helix 43
AE7
K
190 196Right-handed alpha
Helix 44
AE8
K
204 219Right-handed alpha
Helix 45
AE9
K
235 238Right-handed 310
Helix 46
AF1
K
274 287Right-handed alpha
Helix 47
AF2
K
347 372Right-handed alpha
Helix 48
AF3
K
374 378Right-handed 310
Helix 49
AF4
K
384 390Right-handed alpha
Helix 50
AF5
K
390 396Right-handed alpha
Helix 51
AF6
K
412 425Right-handed alpha
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There are 8 sheets in PDB entry 7TR3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 68first strand
Strand 2
A
5 9parallel
Strand 3
A
134 138parallel
Strand 4
A
165 170parallel
Strand 5
A
200 203parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 356first strand
Strand 2
A
315 320parallel
Strand 3
A
375 377anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 91first strand
Strand 2
B
63 66parallel
Strand 3
B
6 9parallel
Strand 4
B
134 138parallel
Strand 5
B
165 170parallel
Strand 6
B
198 203parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 31first strand
Strand 2
B
35 36anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
269 270first strand
Strand 2
B
365 367anti-parallel
Strand 3
B
315 317anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
30 32first strand
Strand 2
K
404 406parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
106 107first strand
Strand 2
K
114 116anti-parallel
Strand 3
K
145 146anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
223 233first strand
Strand 2
K
305 315anti-parallel
Strand 3
K
326 333anti-parallel
Strand 4
K
179 182parallel
Strand 5
K
399 402parallel
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