Analysis of interatomic Contacts of Structural Units in PDB entry:
7TSW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TSW entry

There are 5 chains in PDB entry 7TSW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 31	PHE 301
B	THR 31	PHE 301
C	THR 31	PHE 301
D	PRO 32	PHE 301
E	THR 31	ASN 210

There are 54 helices in PDB entry 7TSW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	125	134	Right-handed alpha
Helix 2	AA2	A	183	196	Right-handed alpha
Helix 3	AA3	A	212	216	Right-handed 310
Helix 4	AA4	A	218	230	Right-handed alpha
Helix 5	AA5	A	254	262	Right-handed alpha
Helix 6	AA6	A	264	268	Right-handed 310
Helix 7	AA7	A	276	283	Right-handed alpha
Helix 8	AA8	A	284	292	Right-handed alpha
Helix 9	AA9	A	294	296	Right-handed 310
Helix 10	AB1	B	125	133	Right-handed alpha
Helix 11	AB2	B	183	197	Right-handed alpha
Helix 12	AB3	B	212	216	Right-handed 310
Helix 13	AB4	B	218	229	Right-handed alpha
Helix 14	AB5	B	254	262	Right-handed alpha
Helix 15	AB6	B	264	268	Right-handed 310
Helix 16	AB7	B	276	283	Right-handed alpha
Helix 17	AB8	B	284	292	Right-handed alpha
Helix 18	AB9	B	294	296	Right-handed 310
Helix 19	AC1	C	125	134	Right-handed alpha
Helix 20	AC2	C	183	197	Right-handed alpha
Helix 21	AC3	C	212	216	Right-handed 310
Helix 22	AC4	C	218	229	Right-handed alpha
Helix 23	AC5	C	254	262	Right-handed alpha
Helix 24	AC6	C	264	268	Right-handed 310
Helix 25	AC7	C	276	283	Right-handed alpha
Helix 26	AC8	C	283	292	Right-handed alpha
Helix 27	AC9	C	294	296	Right-handed 310
Helix 28	AD1	D	125	134	Right-handed alpha
Helix 29	AD2	D	183	197	Right-handed alpha
Helix 30	AD3	D	212	216	Right-handed 310
Helix 31	AD4	D	218	227	Right-handed alpha
Helix 32	AD5	D	254	262	Right-handed alpha
Helix 33	AD6	D	264	268	Right-handed 310
Helix 34	AD7	D	276	283	Right-handed alpha
Helix 35	AD8	D	284	292	Right-handed alpha
Helix 36	AD9	D	294	296	Right-handed 310
Helix 37	AE1	E	125	134	Right-handed alpha
Helix 38	AE2	E	183	196	Right-handed alpha
Helix 39	AE3	E	212	216	Right-handed 310
Helix 40	AE4	E	218	229	Right-handed alpha
Helix 41	AE5	E	254	262	Right-handed alpha
Helix 42	AE6	E	264	268	Right-handed 310
Helix 43	AE7	E	276	283	Right-handed alpha
Helix 44	AE8	E	284	292	Right-handed alpha
Helix 45	AE9	E	294	296	Right-handed 310
Helix 46	AF1	F	125	134	Right-handed alpha
Helix 47	AF2	F	183	197	Right-handed alpha
Helix 48	AF3	F	212	216	Right-handed 310
Helix 49	AF4	F	218	229	Right-handed alpha
Helix 50	AF5	F	254	262	Right-handed alpha
Helix 51	AF6	F	264	268	Right-handed 310
Helix 52	AF7	F	276	284	Right-handed alpha
Helix 53	AF8	F	284	292	Right-handed alpha
Helix 54	AF9	F	294	296	Right-handed 310

There are 23 sheets in PDB entry 7TSW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	34	first strand
Strand 2	A	69	70	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	88	94	first strand
Strand 2	A	78	85	anti-parallel
Strand 3	A	139	146	anti-parallel
Strand 4	A	43	52	anti-parallel
Strand 5	A	57	63	anti-parallel
Strand 6	A	105	111	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	149	153	first strand
Strand 2	A	156	159	anti-parallel
Strand 3	A	168	171	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	249	250	first strand
Strand 2	A	233	239	parallel
Strand 3	A	203	210	parallel
Strand 4	A	174	180	parallel
Strand 5	A	270	274	parallel
Strand 6	A	298	300	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	88	94	first strand
Strand 2	B	78	85	anti-parallel
Strand 3	B	139	146	anti-parallel
Strand 4	B	43	52	anti-parallel
Strand 5	B	57	63	anti-parallel
Strand 6	B	105	111	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	149	153	first strand
Strand 2	B	156	159	anti-parallel
Strand 3	B	168	171	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	249	250	first strand
Strand 2	B	233	239	parallel
Strand 3	B	203	210	parallel
Strand 4	B	174	180	parallel
Strand 5	B	270	274	parallel
Strand 6	B	298	300	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	34	first strand
Strand 2	C	69	70	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	88	94	first strand
Strand 2	C	78	85	anti-parallel
Strand 3	C	139	146	anti-parallel
Strand 4	C	43	52	anti-parallel
Strand 5	C	57	63	anti-parallel
Strand 6	C	105	111	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	149	151	first strand
Strand 2	C	156	159	anti-parallel
Strand 3	C	168	171	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	249	250	first strand
Strand 2	C	233	239	parallel
Strand 3	C	203	210	parallel
Strand 4	C	174	180	parallel
Strand 5	C	270	274	parallel
Strand 6	C	298	300	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	34	first strand
Strand 2	D	69	70	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	88	94	first strand
Strand 2	D	78	85	anti-parallel
Strand 3	D	139	146	anti-parallel
Strand 4	D	43	52	anti-parallel
Strand 5	D	57	63	anti-parallel
Strand 6	D	105	111	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	149	153	first strand
Strand 2	D	156	159	anti-parallel
Strand 3	D	168	171	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	249	250	first strand
Strand 2	D	233	239	parallel
Strand 3	D	203	210	parallel
Strand 4	D	174	180	parallel
Strand 5	D	270	274	parallel
Strand 6	D	298	300	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	33	34	first strand
Strand 2	E	69	70	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	88	94	first strand
Strand 2	E	78	85	anti-parallel
Strand 3	E	139	146	anti-parallel
Strand 4	E	43	54	anti-parallel
Strand 5	E	57	63	anti-parallel
Strand 6	E	105	111	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	149	153	first strand
Strand 2	E	156	159	anti-parallel
Strand 3	E	168	171	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	249	250	first strand
Strand 2	E	233	239	parallel
Strand 3	E	203	210	parallel
Strand 4	E	174	180	parallel
Strand 5	E	270	274	parallel
Strand 6	E	298	300	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	33	34	first strand
Strand 2	F	69	70	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	88	94	first strand
Strand 2	F	78	85	anti-parallel
Strand 3	F	139	146	anti-parallel
Strand 4	F	43	54	anti-parallel
Strand 5	F	57	63	anti-parallel
Strand 6	F	105	111	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	149	153	first strand
Strand 2	F	156	159	anti-parallel
Strand 3	F	168	171	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	249	250	first strand
Strand 2	F	233	239	parallel
Strand 3	F	203	210	parallel
Strand 4	F	174	180	parallel
Strand 5	F	270	274	parallel
Strand 6	F	298	300	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TSW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TSW