Analysis of interatomic Contacts of Structural Units in PDB entry:
7TSX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TSX entry

There are 4 chains in PDB entry 7TSX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 372SER 602
B
 ASN 372TYR 600
C
 GLY 378ALA 381
D
 THR 377ALA 381
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 7TSX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
375 379Right-handed 310
Helix 2
AA2
A
387 401Right-handed alpha
Helix 3
AA3
A
414 421Right-handed 310
Helix 4
AA4
A
424 428Right-handed 310
Helix 5
AA5
A
431 441Right-handed alpha
Helix 6
AA6
A
460 469Right-handed alpha
Helix 7
AA7
A
479 489Right-handed alpha
Helix 8
AA8
A
520 532Right-handed alpha
Helix 9
AA9
A
556 577Right-handed alpha
Helix 10
AB1
B
375 379Right-handed 310
Helix 11
AB2
B
387 401Right-handed alpha
Helix 12
AB3
B
414 421Right-handed 310
Helix 13
AB4
B
424 428Right-handed 310
Helix 14
AB5
B
431 441Right-handed alpha
Helix 15
AB6
B
460 469Right-handed alpha
Helix 16
AB7
B
479 489Right-handed alpha
Helix 17
AB8
B
520 532Right-handed alpha
Helix 18
AB9
B
556 577Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7TSX. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
450 452first strand
Strand 2
A
405 408parallel
Strand 3
A
381 384parallel
Strand 4
A
472 475parallel
Strand 5
A
495 502parallel
Strand 6
A
508 516anti-parallel
Strand 7
A
581 587anti-parallel
Strand 8
A
593 596anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
450 452first strand
Strand 2
B
405 408parallel
Strand 3
B
381 384parallel
Strand 4
B
472 475parallel
Strand 5
B
495 502parallel
Strand 6
B
508 516anti-parallel
Strand 7
B
581 587anti-parallel
Strand 8
B
593 597anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il