Analysis of interatomic Contacts of Structural Units in PDB entry:
7TT0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TT0 entry

There are 5 chains in PDB entry 7TT0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 180TRP 810
E
 LEU 23SER 111
D
 PRO 31SER 243
C
 ASP 38PRO 85
P
 LEU 1264PHE 1300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7TT0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
189 197Right-handed 310
Helix 2
AA2
A
218 232Right-handed alpha
Helix 3
AA3
A
280 288Right-handed alpha
Helix 4
AA4
A
297 315Right-handed alpha
Helix 5
AA5
A
361 366Right-handed alpha
Helix 6
AA6
A
378 393Right-handed alpha
Helix 7
AA7
A
448 452Right-handed 310
Helix 8
AA8
A
542 552Right-handed alpha
Helix 9
AA9
A
647 651Right-handed 310
Helix 10
AB1
A
726 730Right-handed 310
Helix 11
AB2
E
23 27Right-handed 310
Helix 12
AB3
E
39 44Right-handed alpha
Helix 13
AB4
E
51 60Right-handed alpha
Helix 14
AB5
D
32 45Right-handed alpha
Helix 15
AB6
D
47 62Right-handed alpha
Helix 16
AB7
D
67 82Right-handed alpha
Helix 17
AB8
D
84 99Right-handed alpha
Helix 18
AB9
D
104 120Right-handed alpha
Helix 19
AC1
D
122 128Right-handed alpha
Helix 20
AC2
D
131 135Right-handed 310
Helix 21
AC3
D
137 154Right-handed alpha
Helix 22
AC4
D
159 189Right-handed alpha
Helix 23
AC5
D
190 205Right-handed alpha
Helix 24
AC6
D
208 225Right-handed alpha
Helix 25
AC7
D
227 242Right-handed alpha
Helix 26
AC8
C
39 44Right-handed 310
Helix 27
AC9
C
76 80Right-handed 310
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There are 7 sheets in PDB entry 7TT0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 242first strand
Strand 2
A
259 261anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 276first strand
Strand 2
A
334 342parallel
Strand 3
A
321 329anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 355first strand
Strand 2
A
411 420parallel
Strand 3
A
395 401anti-parallel
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There are 19 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
802 806first strand
Strand 2
A
781 792anti-parallel
Strand 3
A
767 778anti-parallel
Strand 4
A
733 745anti-parallel
Strand 5
A
710 720anti-parallel
Strand 6
A
628 640anti-parallel
Strand 7
A
608 620anti-parallel
Strand 8
A
591 600anti-parallel
Strand 9
A
564 579anti-parallel
Strand 10
A
523 537anti-parallel
Strand 11
A
507 518anti-parallel
Strand 12
A
484 494anti-parallel
Strand 13
A
466 475anti-parallel
Strand 14
A
455 462anti-parallel
Strand 15
A
437 446anti-parallel
Strand 16
A
427 433anti-parallel
Strand 17
P
1292 1298anti-parallel
Strand 18
P
1272 1275anti-parallel
Strand 19
P
1265 1269anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
671 674first strand
Strand 2
A
700 705anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
32 34first strand
Strand 2
E
72 80anti-parallel
Strand 3
E
64 65anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
32 34first strand
Strand 2
E
72 80anti-parallel
Strand 3
E
87 95anti-parallel
Strand 4
E
101 107anti-parallel
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