Analysis of interatomic Contacts of Structural Units in PDB entry:
7TTJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TTJ entry

There are 2 chains in PDB entry 7TTJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER -11ILE 673
A
 SER 5LEU 40
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 59 helices in PDB entry 7TTJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
118 122Right-handed 310
Helix 2
AA2
B
124 142Right-handed alpha
Helix 3
AA3
B
159 163Right-handed 310
Helix 4
AA4
B
164 168Right-handed 310
Helix 5
AA5
B
218 226Right-handed alpha
Helix 6
AA6
B
228 239Right-handed alpha
Helix 7
AA7
B
258 263Right-handed alpha
Helix 8
AA8
B
271 278Right-handed alpha
Helix 9
AA9
B
287 290Right-handed 310
Helix 10
AB1
B
343 365Right-handed alpha
Helix 11
AB2
B
371 386Right-handed alpha
Helix 12
AB3
B
390 397Right-handed alpha
Helix 13
AB4
B
402 413Right-handed alpha
Helix 14
AB5
B
431 441Right-handed alpha
Helix 15
AB6
B
444 449Right-handed alpha
Helix 16
AB7
B
449 457Right-handed alpha
Helix 17
AB8
B
468 493Right-handed alpha
Helix 18
AB9
B
495 501Right-handed alpha
Helix 19
AC1
B
502 515Right-handed alpha
Helix 20
AC2
B
520 524Right-handed 310
Helix 21
AC3
B
531 547Right-handed alpha
Helix 22
AC4
B
547 555Right-handed alpha
Helix 23
AC5
B
556 562Right-handed alpha
Helix 24
AC6
B
563 567Right-handed 310
Helix 25
AC7
B
583 591Right-handed alpha
Helix 26
AC8
B
605 609Right-handed 310
Helix 27
AC9
B
627 654Right-handed alpha
Helix 28
AD1
B
663 667Right-handed 310
Helix 29
AD2
A
118 122Right-handed 310
Helix 30
AD3
A
124 142Right-handed alpha
Helix 31
AD4
A
164 168Right-handed 310
Helix 32
AD5
A
170 195Right-handed alpha
Helix 33
AD6
A
196 198Right-handed 310
Helix 34
AD7
A
204 209Right-handed alpha
Helix 35
AD8
A
217 226Right-handed alpha
Helix 36
AD9
A
228 239Right-handed alpha
Helix 37
AE1
A
258 263Right-handed alpha
Helix 38
AE2
A
271 278Right-handed alpha
Helix 39
AE3
A
287 290Right-handed 310
Helix 40
AE4
A
343 365Right-handed alpha
Helix 41
AE5
A
371 386Right-handed alpha
Helix 42
AE6
A
390 397Right-handed alpha
Helix 43
AE7
A
398 400Right-handed 310
Helix 44
AE8
A
402 413Right-handed alpha
Helix 45
AE9
A
431 441Right-handed alpha
Helix 46
AF1
A
445 448Right-handed 310
Helix 47
AF2
A
449 457Right-handed alpha
Helix 48
AF3
A
468 493Right-handed alpha
Helix 49
AF4
A
495 501Right-handed alpha
Helix 50
AF5
A
502 515Right-handed alpha
Helix 51
AF6
A
520 524Right-handed 310
Helix 52
AF7
A
531 547Right-handed alpha
Helix 53
AF8
A
547 555Right-handed alpha
Helix 54
AF9
A
556 562Right-handed alpha
Helix 55
AG1
A
563 567Right-handed 310
Helix 56
AG2
A
583 591Right-handed alpha
Helix 57
AG3
A
593 609Right-handed alpha
Helix 58
AG4
A
627 654Right-handed alpha
Helix 59
AG5
A
663 667Right-handed 310
Back to top of page

There are 9 sheets in PDB entry 7TTJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
-9 -7first strand
Strand 2
B
50 55anti-parallel
Strand 3
B
6 12anti-parallel
Strand 4
B
80 88anti-parallel
Strand 5
B
94 103anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 40first strand
Strand 2
B
23 30anti-parallel
Strand 3
B
64 72anti-parallel
Strand 4
B
109 112anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 145first strand
Strand 2
B
154 155anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
246 247first strand
Strand 2
B
281 285anti-parallel
Strand 3
B
309 314anti-parallel
Strand 4
B
320 326anti-parallel
Strand 5
B
337 338anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 55first strand
Strand 2
A
6 12anti-parallel
Strand 3
A
80 88anti-parallel
Strand 4
A
94 103anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 34first strand
Strand 2
A
23 30anti-parallel
Strand 3
A
38 39anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 34first strand
Strand 2
A
23 30anti-parallel
Strand 3
A
64 72anti-parallel
Strand 4
A
109 112anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 145first strand
Strand 2
A
154 155anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 247first strand
Strand 2
A
281 285anti-parallel
Strand 3
A
309 314anti-parallel
Strand 4
A
320 326anti-parallel
Strand 5
A
337 338anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il