Analysis of interatomic Contacts of Structural Units in PDB entry:
7TVZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TVZ entry

There are 3 chains in PDB entry 7TVZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 30	THR 894
B	HIS 55	THR 894
E	ALA 4	LEU 689

There are 90 helices in PDB entry 7TVZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	43	47	Right-handed 310
Helix 2	AA2	A	103	116	Right-handed alpha
Helix 3	AA3	A	127	142	Right-handed alpha
Helix 4	AA4	A	146	148	Right-handed 310
Helix 5	AA5	A	149	158	Right-handed alpha
Helix 6	AA6	A	164	171	Right-handed 310
Helix 7	AA7	A	194	201	Right-handed alpha
Helix 8	AA8	A	212	220	Right-handed alpha
Helix 9	AA9	A	277	290	Right-handed alpha
Helix 10	AB1	A	291	301	Right-handed alpha
Helix 11	AB2	A	303	317	Right-handed alpha
Helix 12	AB3	A	327	334	Right-handed alpha
Helix 13	AB4	A	335	347	Right-handed alpha
Helix 14	AB5	A	379	390	Right-handed alpha
Helix 15	AB6	A	392	399	Right-handed alpha
Helix 16	AB7	A	402	431	Right-handed alpha
Helix 17	AB8	A	436	455	Right-handed alpha
Helix 18	AB9	A	465	483	Right-handed alpha
Helix 19	AC1	A	488	507	Right-handed alpha
Helix 20	AC2	A	510	516	Right-handed 310
Helix 21	AC3	A	517	547	Right-handed alpha
Helix 22	AC4	A	569	593	Right-handed alpha
Helix 23	AC5	A	598	608	Right-handed alpha
Helix 24	AC6	A	608	624	Right-handed alpha
Helix 25	AC7	A	660	667	Right-handed alpha
Helix 26	AC8	A	667	690	Right-handed alpha
Helix 27	AC9	A	691	695	Right-handed 310
Helix 28	AD1	A	702	719	Right-handed alpha
Helix 29	AD2	A	727	738	Right-handed alpha
Helix 30	AD3	A	760	773	Right-handed alpha
Helix 31	AD4	A	776	781	Right-handed alpha
Helix 32	AD5	A	786	799	Right-handed alpha
Helix 33	AD6	A	803	811	Right-handed alpha
Helix 34	AD7	A	815	819	Right-handed 310
Helix 35	AD8	A	822	827	Right-handed alpha
Helix 36	AD9	A	829	853	Right-handed alpha
Helix 37	AE1	A	855	857	Right-handed 310
Helix 38	AE2	A	858	872	Right-handed alpha
Helix 39	AE3	A	873	877	Right-handed 310
Helix 40	AE4	A	879	887	Right-handed alpha
Helix 41	AE5	B	104	115	Right-handed alpha
Helix 42	AE6	B	127	142	Right-handed alpha
Helix 43	AE7	B	146	148	Right-handed 310
Helix 44	AE8	B	149	158	Right-handed alpha
Helix 45	AE9	B	163	167	Right-handed 310
Helix 46	AF1	B	195	200	Right-handed alpha
Helix 47	AF2	B	212	220	Right-handed alpha
Helix 48	AF3	B	277	291	Right-handed alpha
Helix 49	AF4	B	291	301	Right-handed alpha
Helix 50	AF5	B	303	317	Right-handed alpha
Helix 51	AF6	B	331	334	Right-handed 310
Helix 52	AF7	B	335	347	Right-handed alpha
Helix 53	AF8	B	379	390	Right-handed alpha
Helix 54	AF9	B	392	399	Right-handed alpha
Helix 55	AG1	B	402	431	Right-handed alpha
Helix 56	AG2	B	437	455	Right-handed alpha
Helix 57	AG3	B	465	483	Right-handed alpha
Helix 58	AG4	B	488	507	Right-handed alpha
Helix 59	AG5	B	510	516	Right-handed 310
Helix 60	AG6	B	517	547	Right-handed alpha
Helix 61	AG7	B	570	593	Right-handed alpha
Helix 62	AG8	B	598	608	Right-handed alpha
Helix 63	AG9	B	608	624	Right-handed alpha
Helix 64	AH1	B	660	667	Right-handed alpha
Helix 65	AH2	B	667	690	Right-handed alpha
Helix 66	AH3	B	702	720	Right-handed alpha
Helix 67	AH4	B	727	738	Right-handed alpha
Helix 68	AH5	B	760	773	Right-handed alpha
Helix 69	AH6	B	776	781	Right-handed alpha
Helix 70	AH7	B	784	799	Right-handed alpha
Helix 71	AH8	B	803	811	Right-handed alpha
Helix 72	AH9	B	822	827	Right-handed alpha
Helix 73	AI1	B	829	853	Right-handed alpha
Helix 74	AI2	B	855	857	Right-handed 310
Helix 75	AI3	B	858	872	Right-handed alpha
Helix 76	AI4	B	873	877	Right-handed 310
Helix 77	AI5	B	879	887	Right-handed alpha
Helix 78	AI6	E	13	21	Right-handed alpha
Helix 79	AI7	E	52	58	Right-handed alpha
Helix 80	AI8	E	151	159	Right-handed alpha
Helix 81	AI9	E	187	197	Right-handed alpha
Helix 82	AJ1	E	201	206	Right-handed 310
Helix 83	AJ2	E	207	227	Right-handed alpha
Helix 84	AJ3	E	238	242	Right-handed 310
Helix 85	AJ4	E	248	258	Right-handed alpha
Helix 86	AJ5	E	269	283	Right-handed alpha
Helix 87	AJ6	E	368	374	Right-handed alpha
Helix 88	AJ7	E	381	388	Right-handed alpha
Helix 89	AJ8	E	432	435	Right-handed 310
Helix 90	AJ9	E	441	458	Right-handed alpha

There are 20 sheets in PDB entry 7TVZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	36	first strand
Strand 2	E	635	638	anti-parallel
Strand 3	E	622	626	anti-parallel
Strand 4	E	660	669	anti-parallel
Strand 5	E	676	685	anti-parallel
Strand 6	E	597	599	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	87	first strand
Strand 2	A	73	80	anti-parallel
Strand 3	A	56	67	anti-parallel
Strand 4	A	224	231	parallel
Strand 5	A	262	269	parallel
Strand 6	A	241	251	anti-parallel
Strand 7	A	118	123	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	87	first strand
Strand 2	A	73	80	anti-parallel
Strand 3	A	56	67	anti-parallel
Strand 4	A	173	175	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	103	first strand
Strand 2	A	319	321	anti-parallel
Strand 3	B	319	321	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	462	463	first strand
Strand 2	A	725	726	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	739	742	first strand
Strand 2	A	752	756	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	87	first strand
Strand 2	B	73	81	anti-parallel
Strand 3	B	58	67	anti-parallel
Strand 4	B	161	162	first strand

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	123	first strand
Strand 2	B	241	251	parallel
Strand 3	B	262	269	anti-parallel
Strand 4	B	226	231	parallel
Strand 5	B	58	67	parallel
Strand 6	B	73	81	anti-parallel
Strand 7	B	173	175	first strand

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	177	178	first strand
Strand 2	B	233	234	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	462	463	first strand
Strand 2	B	725	726	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	739	742	first strand
Strand 2	B	752	756	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	7	12	first strand
Strand 2	E	39	45	anti-parallel
Strand 3	E	101	107	anti-parallel
Strand 4	E	91	97	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	34	first strand
Strand 2	E	129	137	parallel
Strand 3	E	115	123	anti-parallel
Strand 4	E	59	65	anti-parallel
Strand 5	E	76	80	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	163	169	first strand
Strand 2	E	174	180	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	363	367	first strand
Strand 2	E	345	351	anti-parallel
Strand 3	E	323	334	anti-parallel
Strand 4	E	286	295	anti-parallel
Strand 5	E	416	421	anti-parallel
Strand 6	E	428	430	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	303	308	first strand
Strand 2	E	392	397	parallel
Strand 3	E	405	406	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	408	409	first strand
Strand 2	E	576	586	parallel
Strand 3	E	484	486	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	408	409	first strand
Strand 2	E	576	586	parallel
Strand 3	E	561	570	anti-parallel
Strand 4	E	505	516	anti-parallel
Strand 5	E	522	535	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	475	480	first strand
Strand 2	E	490	499	anti-parallel
Strand 3	E	541	548	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	590	593	first strand
Strand 2	E	604	611	anti-parallel
Strand 3	E	647	654	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TVZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TVZ