Analysis of interatomic Contacts of Structural Units in PDB entry:
7TXQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TXQ entry

There is 1 chain in PDB entry 7TXQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 209
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 4 helices in PDB entry 7TXQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
34 38Right-handed 310
Helix 3
AA3
A
50 58Right-handed 310
Helix 4
AA4
A
68 80Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 7TXQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 42first strand
Strand 2
A
45 49anti-parallel
Strand 3
A
27 31parallel
Strand 4
A
4 7parallel
Strand 5
A
61 64parallel
Strand 6
A
86 87parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 91first strand
Strand 2
A
108 109parallel
Strand 3
A
126 127parallel
Strand 4
A
144 145parallel
Strand 5
A
162 163parallel
Strand 6
A
180 181parallel
Strand 7
A
195 198parallel
Strand 8
A
203 207anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 99first strand
Strand 2
A
114 117parallel
Strand 3
A
132 133parallel
Strand 4
A
150 151parallel
Strand 5
A
168 169parallel
Strand 6
A
186 187parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
120 121parallel
Strand 3
A
138 139parallel
Strand 4
A
156 157parallel
Strand 5
A
174 175parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il