Analysis of interatomic Contacts of Structural Units in PDB entry:
7TYA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TYA entry

There are 6 chains in PDB entry 7TYA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 369SER 538
A
 LEU 540VAL 850
A
 SER 852ALA 891
B
 ASP 369SER 538
B
 LEU 540VAL 850
B
 SER 852ALA 891
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 7TYA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
379 390Right-handed alpha
Helix 2
AA2
A
391 393Right-handed 310
Helix 3
AA3
A
394 399Right-handed alpha
Helix 4
AA4
A
402 431Right-handed alpha
Helix 5
AA5
A
436 455Right-handed alpha
Helix 6
AA6
A
465 483Right-handed alpha
Helix 7
AA7
A
485 507Right-handed alpha
Helix 8
AA8
A
508 516Right-handed 310
Helix 9
AA9
A
517 547Right-handed alpha
Helix 10
AB1
A
569 594Right-handed alpha
Helix 11
AB2
A
598 608Right-handed alpha
Helix 12
AB3
A
608 624Right-handed alpha
Helix 13
AB4
A
662 667Right-handed alpha
Helix 14
AB5
A
667 690Right-handed alpha
Helix 15
AB6
A
701 717Right-handed alpha
Helix 16
AB7
A
718 720Right-handed 310
Helix 17
AB8
A
727 738Right-handed alpha
Helix 18
AB9
A
760 773Right-handed alpha
Helix 19
AC1
A
776 781Right-handed alpha
Helix 20
AC2
A
784 799Right-handed alpha
Helix 21
AC3
A
803 812Right-handed alpha
Helix 22
AC4
A
822 827Right-handed alpha
Helix 23
AC5
A
829 853Right-handed alpha
Helix 24
AC6
A
859 865Right-handed alpha
Helix 25
AC7
A
865 873Right-handed alpha
Helix 26
AC8
A
879 887Right-handed alpha
Helix 27
AC9
B
379 390Right-handed alpha
Helix 28
AD1
B
391 393Right-handed 310
Helix 29
AD2
B
394 399Right-handed alpha
Helix 30
AD3
B
402 431Right-handed alpha
Helix 31
AD4
B
436 455Right-handed alpha
Helix 32
AD5
B
465 483Right-handed alpha
Helix 33
AD6
B
485 507Right-handed alpha
Helix 34
AD7
B
508 516Right-handed 310
Helix 35
AD8
B
517 547Right-handed alpha
Helix 36
AD9
B
569 594Right-handed alpha
Helix 37
AE1
B
598 608Right-handed alpha
Helix 38
AE2
B
608 624Right-handed alpha
Helix 39
AE3
B
662 667Right-handed alpha
Helix 40
AE4
B
667 690Right-handed alpha
Helix 41
AE5
B
701 717Right-handed alpha
Helix 42
AE6
B
718 720Right-handed 310
Helix 43
AE7
B
727 738Right-handed alpha
Helix 44
AE8
B
760 773Right-handed alpha
Helix 45
AE9
B
776 781Right-handed alpha
Helix 46
AF1
B
784 799Right-handed alpha
Helix 47
AF2
B
803 812Right-handed alpha
Helix 48
AF3
B
822 827Right-handed alpha
Helix 49
AF4
B
829 853Right-handed alpha
Helix 50
AF5
B
859 865Right-handed alpha
Helix 51
AF6
B
865 873Right-handed alpha
Helix 52
AF7
B
879 887Right-handed alpha
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There are 4 sheets in PDB entry 7TYA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
462 463first strand
Strand 2
A
725 726anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
739 742first strand
Strand 2
A
752 756anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
462 463first strand
Strand 2
B
725 726anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
739 742first strand
Strand 2
B
752 756anti-parallel
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