Analysis of interatomic Contacts of Structural Units in PDB entry:
7TYH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TYH entry

There are 7 chains in PDB entry 7TYH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 11	LEU 394
B	SER 2	TRP 339
G	SER 8	PHE 61
N	GLN 1	SER 127
E	ASN 60	ARG 167
P	CYS 1	PRO 32
R	LYS 37	GLN 405

There are 38 helices in PDB entry 7TYH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	39	Right-handed alpha
Helix 2	AA2	A	53	57	Right-handed 310
Helix 3	AA3	A	233	239	Right-handed 310
Helix 4	AA4	A	264	278	Right-handed alpha
Helix 5	AA5	A	293	301	Right-handed alpha
Helix 6	AA6	A	306	311	Right-handed alpha
Helix 7	AA7	A	331	352	Right-handed alpha
Helix 8	AA8	A	370	391	Right-handed alpha
Helix 9	AA9	B	3	25	Right-handed alpha
Helix 10	AB1	G	9	22	Right-handed alpha
Helix 11	AB2	G	29	34	Right-handed alpha
Helix 12	AB3	G	34	44	Right-handed alpha
Helix 13	AB4	E	61	77	Right-handed alpha
Helix 14	AB5	E	78	80	Right-handed 310
Helix 15	AB6	E	89	104	Right-handed alpha
Helix 16	AB7	E	113	127	Right-handed alpha
Helix 17	AB8	E	147	156	Right-handed alpha
Helix 18	AB9	E	157	166	Right-handed alpha
Helix 19	AC1	P	7	22	Right-handed alpha
Helix 20	AC2	R	38	62	Right-handed alpha
Helix 21	AC3	R	131	136	Right-handed alpha
Helix 22	AC4	R	137	162	Right-handed alpha
Helix 23	AC5	R	163	171	Right-handed alpha
Helix 24	AC6	R	178	205	Right-handed alpha
Helix 25	AC7	R	208	214	Right-handed alpha
Helix 26	AC8	R	216	246	Right-handed alpha
Helix 27	AC9	R	261	268	Right-handed alpha
Helix 28	AD1	R	270	284	Right-handed alpha
Helix 29	AD2	R	295	297	Right-handed 310
Helix 30	AD3	R	298	315	Right-handed alpha
Helix 31	AD4	R	318	329	Right-handed alpha
Helix 32	AD5	R	333	338	Right-handed alpha
Helix 33	AD6	R	338	344	Right-handed alpha
Helix 34	AD7	R	344	353	Right-handed alpha
Helix 35	AD8	R	365	382	Right-handed alpha
Helix 36	AD9	R	382	389	Right-handed alpha
Helix 37	AE1	R	395	400	Right-handed alpha
Helix 38	AE2	R	400	405	Right-handed alpha

There are 12 sheets in PDB entry 7TYH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	213	first strand
Strand 2	A	218	224	anti-parallel
Strand 3	A	41	45	parallel
Strand 4	A	243	249	parallel
Strand 5	A	286	292	parallel
Strand 6	A	359	363	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	51	first strand
Strand 2	B	336	338	anti-parallel
Strand 3	B	327	330	anti-parallel
Strand 4	B	317	320	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	81	83	anti-parallel
Strand 4	B	88	91	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	103	105	first strand
Strand 2	B	111	114	anti-parallel
Strand 3	B	121	125	anti-parallel
Strand 4	B	134	139	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	151	first strand
Strand 2	B	156	161	anti-parallel
Strand 3	B	165	170	anti-parallel
Strand 4	B	176	181	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	198	203	anti-parallel
Strand 3	B	208	212	anti-parallel
Strand 4	B	218	222	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	240	245	anti-parallel
Strand 3	B	250	254	anti-parallel
Strand 4	B	262	264	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	275	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	294	298	anti-parallel
Strand 4	B	306	308	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	3	5	first strand
Strand 2	N	23	25	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	11	12	first strand
Strand 2	N	123	126	parallel
Strand 3	N	92	95	anti-parallel
Strand 4	N	34	39	anti-parallel
Strand 5	N	45	51	anti-parallel
Strand 6	N	58	60	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	17	19	first strand
Strand 2	N	79	84	anti-parallel
Strand 3	N	68	72	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	75	76	first strand
Strand 2	R	81	82	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TYH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TYH