Analysis of interatomic Contacts of Structural Units in PDB entry:
7TYZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TYZ entry

There are 6 chains in PDB entry 7TYZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 14	ASP 1146
B	GLY 15	SER 169
C	GLN 14	ASP 1146
D	GLY 15	SER 169
E	GLN 14	ASP 1146
F	GLY 15	SER 169

There are 90 helices in PDB entry 7TYZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	294	303	Right-handed alpha
Helix 2	AA2	A	337	343	Right-handed alpha
Helix 3	AA3	A	365	370	Right-handed alpha
Helix 4	AA4	A	384	388	Right-handed 310
Helix 5	AA5	A	403	410	Right-handed 310
Helix 6	AA6	A	502	506	Right-handed 310
Helix 7	AA7	A	619	623	Right-handed 310
Helix 8	AA8	A	737	743	Right-handed alpha
Helix 9	AA9	A	746	754	Right-handed alpha
Helix 10	AB1	A	758	782	Right-handed alpha
Helix 11	AB2	A	816	824	Right-handed alpha
Helix 12	AB3	A	866	885	Right-handed alpha
Helix 13	AB4	A	886	890	Right-handed 310
Helix 14	AB5	A	897	907	Right-handed alpha
Helix 15	AB6	A	913	919	Right-handed alpha
Helix 16	AB7	A	919	940	Right-handed alpha
Helix 17	AB8	A	945	965	Right-handed alpha
Helix 18	AB9	A	966	968	Right-handed 310
Helix 19	AC1	A	976	983	Right-handed alpha
Helix 20	AC2	A	985	1033	Right-handed alpha
Helix 21	AC3	A	1141	1146	Right-handed 310
Helix 22	AC4	B	16	24	Right-handed alpha
Helix 23	AC5	B	27	37	Right-handed alpha
Helix 24	AC6	B	49	58	Right-handed alpha
Helix 25	AC7	B	59	70	Right-handed alpha
Helix 26	AC8	B	82	91	Right-handed alpha
Helix 27	AC9	B	92	103	Right-handed alpha
Helix 28	AD1	B	115	123	Right-handed alpha
Helix 29	AD2	B	125	135	Right-handed alpha
Helix 30	AD3	B	148	157	Right-handed alpha
Helix 31	AD4	B	158	168	Right-handed alpha
Helix 32	AD5	C	294	303	Right-handed alpha
Helix 33	AD6	C	337	343	Right-handed alpha
Helix 34	AD7	C	365	370	Right-handed alpha
Helix 35	AD8	C	385	390	Right-handed 310
Helix 36	AD9	C	403	410	Right-handed 310
Helix 37	AE1	C	502	506	Right-handed 310
Helix 38	AE2	C	737	743	Right-handed alpha
Helix 39	AE3	C	746	754	Right-handed alpha
Helix 40	AE4	C	761	783	Right-handed alpha
Helix 41	AE5	C	816	824	Right-handed alpha
Helix 42	AE6	C	866	885	Right-handed alpha
Helix 43	AE7	C	886	890	Right-handed 310
Helix 44	AE8	C	897	907	Right-handed alpha
Helix 45	AE9	C	913	919	Right-handed alpha
Helix 46	AF1	C	919	941	Right-handed alpha
Helix 47	AF2	C	945	965	Right-handed alpha
Helix 48	AF3	C	966	968	Right-handed 310
Helix 49	AF4	C	976	983	Right-handed alpha
Helix 50	AF5	C	985	1033	Right-handed alpha
Helix 51	AF6	C	1141	1146	Right-handed 310
Helix 52	AF7	D	16	25	Right-handed alpha
Helix 53	AF8	D	26	36	Right-handed alpha
Helix 54	AF9	D	49	58	Right-handed alpha
Helix 55	AG1	D	59	69	Right-handed alpha
Helix 56	AG2	D	82	91	Right-handed alpha
Helix 57	AG3	D	92	103	Right-handed alpha
Helix 58	AG4	D	115	124	Right-handed alpha
Helix 59	AG5	D	125	136	Right-handed alpha
Helix 60	AG6	D	148	157	Right-handed alpha
Helix 61	AG7	D	158	168	Right-handed alpha
Helix 62	AG8	E	294	301	Right-handed alpha
Helix 63	AG9	E	337	343	Right-handed alpha
Helix 64	AH1	E	365	370	Right-handed alpha
Helix 65	AH2	E	403	410	Right-handed 310
Helix 66	AH3	E	502	506	Right-handed 310
Helix 67	AH4	E	737	743	Right-handed alpha
Helix 68	AH5	E	746	754	Right-handed alpha
Helix 69	AH6	E	758	783	Right-handed alpha
Helix 70	AH7	E	816	824	Right-handed alpha
Helix 71	AH8	E	866	885	Right-handed alpha
Helix 72	AH9	E	886	890	Right-handed 310
Helix 73	AI1	E	897	907	Right-handed alpha
Helix 74	AI2	E	913	919	Right-handed alpha
Helix 75	AI3	E	919	941	Right-handed alpha
Helix 76	AI4	E	945	965	Right-handed alpha
Helix 77	AI5	E	966	968	Right-handed 310
Helix 78	AI6	E	976	983	Right-handed alpha
Helix 79	AI7	E	985	1033	Right-handed alpha
Helix 80	AI8	E	1141	1146	Right-handed 310
Helix 81	AI9	F	16	25	Right-handed alpha
Helix 82	AJ1	F	26	36	Right-handed alpha
Helix 83	AJ2	F	49	57	Right-handed alpha
Helix 84	AJ3	F	60	70	Right-handed alpha
Helix 85	AJ4	F	82	91	Right-handed alpha
Helix 86	AJ5	F	93	103	Right-handed alpha
Helix 87	AJ6	F	115	123	Right-handed alpha
Helix 88	AJ7	F	125	135	Right-handed alpha
Helix 89	AJ8	F	148	157	Right-handed alpha
Helix 90	AJ9	F	158	167	Right-handed alpha

There are 51 sheets in PDB entry 7TYZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	30	first strand
Strand 2	A	61	68	anti-parallel
Strand 3	A	262	269	anti-parallel
Strand 4	A	89	96	anti-parallel
Strand 5	A	188	197	anti-parallel
Strand 6	A	200	209	anti-parallel
Strand 7	A	225	230	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	E	565	566	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	241	anti-parallel
Strand 3	A	103	107	anti-parallel
Strand 4	A	116	120	anti-parallel
Strand 5	A	125	131	anti-parallel
Strand 6	A	168	174	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	135	first strand
Strand 2	A	160	163	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	145	first strand
Strand 2	A	152	157	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	310	318	first strand
Strand 2	A	593	600	anti-parallel
Strand 3	A	609	613	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	642	644	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	326	first strand
Strand 2	A	538	541	parallel
Strand 3	A	548	551	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	358	first strand
Strand 2	A	394	397	anti-parallel
Strand 3	A	508	516	anti-parallel
Strand 4	A	432	437	anti-parallel
Strand 5	A	377	378	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	358	first strand
Strand 2	A	394	397	anti-parallel
Strand 3	A	508	516	anti-parallel
Strand 4	A	400	401	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	453	first strand
Strand 2	A	493	494	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	659	first strand
Strand 2	A	693	696	parallel
Strand 3	A	670	673	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	701	702	first strand
Strand 2	C	787	788	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	712	715	first strand
Strand 2	A	1072	1075	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	718	728	first strand
Strand 2	A	1059	1069	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	735	736	first strand
Strand 2	A	858	859	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	787	788	first strand
Strand 2	E	701	702	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1122	first strand
Strand 2	A	1087	1090	anti-parallel
Strand 3	A	1081	1082	anti-parallel
Strand 4	A	1133	1134	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1094	1097	first strand
Strand 2	A	1102	1105	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	61	68	anti-parallel
Strand 3	C	262	269	anti-parallel
Strand 4	C	89	96	anti-parallel
Strand 5	C	188	197	anti-parallel
Strand 6	C	200	209	anti-parallel
Strand 7	C	225	230	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	37	first strand
Strand 2	C	222	223	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	237	241	anti-parallel
Strand 3	C	103	107	anti-parallel
Strand 4	C	116	120	anti-parallel
Strand 5	C	125	131	anti-parallel
Strand 6	C	166	174	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	145	first strand
Strand 2	C	152	157	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	318	first strand
Strand 2	C	593	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	643	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	325	326	first strand
Strand 2	C	538	541	parallel
Strand 3	C	548	551	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	356	358	first strand
Strand 2	C	395	397	anti-parallel
Strand 3	C	508	515	anti-parallel
Strand 4	C	432	437	anti-parallel
Strand 5	C	376	378	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	356	358	first strand
Strand 2	C	395	397	anti-parallel
Strand 3	C	508	515	anti-parallel
Strand 4	C	400	401	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	453	first strand
Strand 2	C	493	494	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	659	first strand
Strand 2	C	693	696	parallel
Strand 3	C	670	673	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	701	702	first strand
Strand 2	E	787	788	parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	712	715	first strand
Strand 2	C	1072	1077	anti-parallel
Strand 3	C	1094	1097	anti-parallel
Strand 4	C	1103	1105	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	718	728	first strand
Strand 2	C	1059	1069	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	735	736	first strand
Strand 2	C	858	859	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1122	first strand
Strand 2	C	1087	1090	anti-parallel
Strand 3	C	1081	1082	anti-parallel
Strand 4	C	1133	1134	parallel

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There are 7 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	27	30	first strand
Strand 2	E	61	68	anti-parallel
Strand 3	E	262	269	anti-parallel
Strand 4	E	89	96	anti-parallel
Strand 5	E	188	197	anti-parallel
Strand 6	E	200	208	anti-parallel
Strand 7	E	224	230	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	50	55	first strand
Strand 2	E	271	279	anti-parallel
Strand 3	E	285	290	anti-parallel

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There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	84	85	first strand
Strand 2	E	237	241	anti-parallel
Strand 3	E	103	107	anti-parallel
Strand 4	E	116	120	anti-parallel
Strand 5	E	125	131	anti-parallel
Strand 6	E	166	174	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	141	145	first strand
Strand 2	E	152	157	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	310	318	first strand
Strand 2	E	593	600	anti-parallel
Strand 3	E	609	613	anti-parallel
Strand 4	E	648	651	anti-parallel
Strand 5	E	642	643	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	310	318	first strand
Strand 2	E	593	600	anti-parallel
Strand 3	E	609	613	anti-parallel
Strand 4	E	648	651	anti-parallel
Strand 5	E	645	645	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	325	326	first strand
Strand 2	E	538	541	parallel
Strand 3	E	548	551	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	376	378	first strand
Strand 2	E	432	437	anti-parallel
Strand 3	E	508	516	anti-parallel
Strand 4	E	394	396	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	376	378	first strand
Strand 2	E	432	437	anti-parallel
Strand 3	E	508	516	anti-parallel
Strand 4	E	400	401	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	452	453	first strand
Strand 2	E	493	494	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	654	659	first strand
Strand 2	E	693	696	parallel
Strand 3	E	670	673	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	712	715	first strand
Strand 2	E	1072	1075	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	718	728	first strand
Strand 2	E	1059	1069	anti-parallel
Strand 3	E	1047	1056	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	735	736	first strand
Strand 2	E	858	859	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1120	1125	first strand
Strand 2	E	1086	1090	anti-parallel
Strand 3	E	1081	1082	anti-parallel
Strand 4	E	1133	1134	parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1094	1097	first strand
Strand 2	E	1102	1105	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TYZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TYZ