Analysis of interatomic Contacts of Structural Units in PDB entry:
7U0F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7U0F entry

There are 10 chains in PDB entry 7U0F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 2	VAL 440
B	MET 1	ALA 428
C	ARG 2	TYR 451
D	MET 1	GLU 444
E	ASP 11	GLY 65
F	ASP 11	GLY 65
G	ASP 11	GLY 65
H	ASP 11	GLY 65
I	ASP 11	GLY 65
J	LEU 13	TYR 63

There are 73 helices in PDB entry 7U0F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	28	Right-handed alpha
Helix 2	AA2	A	72	80	Right-handed alpha
Helix 3	AA3	A	103	108	Right-handed alpha
Helix 4	AA4	A	110	113	Right-handed 310
Helix 5	AA5	A	114	127	Right-handed alpha
Helix 6	AA6	A	146	161	Right-handed alpha
Helix 7	AA7	A	182	194	Right-handed alpha
Helix 8	AA8	A	206	215	Right-handed alpha
Helix 9	AA9	A	223	244	Right-handed alpha
Helix 10	AB1	A	251	260	Right-handed alpha
Helix 11	AB2	A	289	294	Right-handed alpha
Helix 12	AB3	A	297	301	Right-handed 310
Helix 13	AB4	A	327	335	Right-handed alpha
Helix 14	AB5	A	384	400	Right-handed alpha
Helix 15	AB6	A	405	409	Right-handed 310
Helix 16	AB7	A	414	435	Right-handed alpha
Helix 17	AB8	B	12	25	Right-handed alpha
Helix 18	AB9	B	43	49	Right-handed alpha
Helix 19	AC1	B	70	77	Right-handed alpha
Helix 20	AC2	B	100	106	Right-handed alpha
Helix 21	AC3	B	108	111	Right-handed 310
Helix 22	AC4	B	112	125	Right-handed alpha
Helix 23	AC5	B	142	159	Right-handed alpha
Helix 24	AC6	B	180	187	Right-handed alpha
Helix 25	AC7	B	188	193	Right-handed alpha
Helix 26	AC8	B	204	213	Right-handed alpha
Helix 27	AC9	B	221	242	Right-handed alpha
Helix 28	AD1	B	249	258	Right-handed alpha
Helix 29	AD2	B	286	291	Right-handed alpha
Helix 30	AD3	B	323	336	Right-handed alpha
Helix 31	AD4	B	372	390	Right-handed alpha
Helix 32	AD5	B	394	398	Right-handed 310
Helix 33	AD6	B	405	427	Right-handed alpha
Helix 34	AD7	C	9	28	Right-handed alpha
Helix 35	AD8	C	71	80	Right-handed alpha
Helix 36	AD9	C	102	109	Right-handed alpha
Helix 37	AE1	C	114	125	Right-handed alpha
Helix 38	AE2	C	146	160	Right-handed alpha
Helix 39	AE3	C	182	195	Right-handed alpha
Helix 40	AE4	C	206	215	Right-handed alpha
Helix 41	AE5	C	223	244	Right-handed alpha
Helix 42	AE6	C	251	260	Right-handed alpha
Helix 43	AE7	C	289	294	Right-handed alpha
Helix 44	AE8	C	326	336	Right-handed alpha
Helix 45	AE9	C	381	383	Right-handed 310
Helix 46	AF1	C	384	402	Right-handed alpha
Helix 47	AF2	C	414	431	Right-handed alpha
Helix 48	AF3	D	13	26	Right-handed alpha
Helix 49	AF4	D	43	49	Right-handed alpha
Helix 50	AF5	D	70	77	Right-handed alpha
Helix 51	AF6	D	100	107	Right-handed alpha
Helix 52	AF7	D	108	124	Right-handed alpha
Helix 53	AF8	D	142	159	Right-handed alpha
Helix 54	AF9	D	181	194	Right-handed alpha
Helix 55	AG1	D	204	214	Right-handed alpha
Helix 56	AG2	D	221	242	Right-handed alpha
Helix 57	AG3	D	249	258	Right-handed alpha
Helix 58	AG4	D	285	291	Right-handed alpha
Helix 59	AG5	D	323	337	Right-handed alpha
Helix 60	AG6	D	374	388	Right-handed alpha
Helix 61	AG7	D	404	426	Right-handed alpha
Helix 62	AG8	E	14	25	Right-handed alpha
Helix 63	AG9	E	36	62	Right-handed alpha
Helix 64	AH1	F	16	25	Right-handed alpha
Helix 65	AH2	F	40	60	Right-handed alpha
Helix 66	AH3	G	12	23	Right-handed alpha
Helix 67	AH4	G	34	62	Right-handed alpha
Helix 68	AH5	H	12	25	Right-handed alpha
Helix 69	AH6	H	36	62	Right-handed alpha
Helix 70	AH7	I	12	24	Right-handed alpha
Helix 71	AH8	I	34	64	Right-handed alpha
Helix 72	AH9	J	14	24	Right-handed alpha
Helix 73	AI1	J	36	63	Right-handed alpha

There are 13 sheets in PDB entry 7U0F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	68	first strand
Strand 2	A	6	9	parallel
Strand 3	A	137	140	parallel
Strand 4	A	168	172	parallel
Strand 5	A	201	205	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	268	271	first strand
Strand 2	A	377	380	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	6	8	first strand
Strand 2	B	63	65	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	53	first strand
Strand 2	B	59	60	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	132	137	first strand
Strand 2	B	163	168	parallel
Strand 3	B	198	200	parallel
Strand 4	B	265	266	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	270	first strand
Strand 2	B	366	367	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	315	316	first strand
Strand 2	B	351	352	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	67	first strand
Strand 2	C	5	8	parallel
Strand 3	C	135	138	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	171	172	first strand
Strand 2	C	204	205	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	65	first strand
Strand 2	D	3	8	parallel
Strand 3	D	130	135	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	52	55	first strand
Strand 2	D	58	60	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	168	170	first strand
Strand 2	D	201	203	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	313	314	first strand
Strand 2	D	368	369	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7U0F

Analysis of interatomic Contacts of Structural Units in PDB entry:
7U0F