Analysis of interatomic Contacts of Structural Units in PDB entry:
7U1H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7U1H entry

There are 3 chains in PDB entry 7U1H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 8	ALA 413
B	ASN 8	ALA 413
C	ASN 8	ALA 413

There are 33 helices in PDB entry 7U1H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	15	Right-handed 310
Helix 2	AA2	A	33	38	Right-handed alpha
Helix 3	AA3	A	39	45	Right-handed 310
Helix 4	AA4	A	146	151	Right-handed 310
Helix 5	AA5	A	152	161	Right-handed alpha
Helix 6	AA6	A	163	172	Right-handed alpha
Helix 7	AA7	A	202	210	Right-handed alpha
Helix 8	AA8	A	248	256	Right-handed 310
Helix 9	AA9	A	378	382	Right-handed 310
Helix 10	AB1	A	383	391	Right-handed alpha
Helix 11	AB2	A	394	404	Right-handed alpha
Helix 12	AB3	B	13	15	Right-handed 310
Helix 13	AB4	B	33	38	Right-handed alpha
Helix 14	AB5	B	39	45	Right-handed 310
Helix 15	AB6	B	146	151	Right-handed 310
Helix 16	AB7	B	152	161	Right-handed alpha
Helix 17	AB8	B	163	171	Right-handed alpha
Helix 18	AB9	B	202	211	Right-handed alpha
Helix 19	AC1	B	252	256	Right-handed 310
Helix 20	AC2	B	378	382	Right-handed 310
Helix 21	AC3	B	383	391	Right-handed alpha
Helix 22	AC4	B	394	405	Right-handed alpha
Helix 23	AC5	C	13	15	Right-handed 310
Helix 24	AC6	C	33	38	Right-handed alpha
Helix 25	AC7	C	39	45	Right-handed 310
Helix 26	AC8	C	146	151	Right-handed 310
Helix 27	AC9	C	152	161	Right-handed alpha
Helix 28	AD1	C	163	171	Right-handed alpha
Helix 29	AD2	C	202	211	Right-handed alpha
Helix 30	AD3	C	252	256	Right-handed 310
Helix 31	AD4	C	378	382	Right-handed 310
Helix 32	AD5	C	383	391	Right-handed alpha
Helix 33	AD6	C	394	404	Right-handed alpha

There are 18 sheets in PDB entry 7U1H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	12	first strand
Strand 2	A	337	340	anti-parallel
Strand 3	A	282	289	anti-parallel
Strand 4	A	354	361	anti-parallel
Strand 5	A	260	267	anti-parallel
Strand 6	A	242	247	anti-parallel
Strand 7	A	237	239	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	23	first strand
Strand 2	A	26	31	anti-parallel
Strand 3	A	48	54	anti-parallel
Strand 4	A	118	126	anti-parallel
Strand 5	A	67	75	anti-parallel
Strand 6	A	97	101	anti-parallel
Strand 7	A	228	229	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	88	94	first strand
Strand 2	A	77	83	anti-parallel
Strand 3	A	106	111	anti-parallel
Strand 4	A	58	65	anti-parallel
Strand 5	A	135	137	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	88	94	first strand
Strand 2	A	77	83	anti-parallel
Strand 3	A	106	111	anti-parallel
Strand 4	A	58	65	anti-parallel
Strand 5	A	198	200	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	332	first strand
Strand 2	A	292	298	anti-parallel
Strand 3	A	346	350	anti-parallel
Strand 4	A	271	278	anti-parallel
Strand 5	A	368	370	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	332	first strand
Strand 2	A	292	298	anti-parallel
Strand 3	A	346	350	anti-parallel
Strand 4	A	271	278	anti-parallel
Strand 5	A	410	412	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	12	first strand
Strand 2	B	337	340	anti-parallel
Strand 3	B	282	289	anti-parallel
Strand 4	B	354	361	anti-parallel
Strand 5	B	260	267	anti-parallel
Strand 6	B	242	247	anti-parallel
Strand 7	B	237	239	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	23	first strand
Strand 2	B	26	31	anti-parallel
Strand 3	B	48	54	anti-parallel
Strand 4	B	118	126	anti-parallel
Strand 5	B	67	75	anti-parallel
Strand 6	B	97	101	anti-parallel
Strand 7	B	228	229	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	137	first strand
Strand 2	B	58	65	anti-parallel
Strand 3	B	198	200	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	137	first strand
Strand 2	B	58	65	anti-parallel
Strand 3	B	106	111	anti-parallel
Strand 4	B	77	84	anti-parallel
Strand 5	B	87	94	anti-parallel
Strand 6	B	213	214	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	326	332	first strand
Strand 2	B	292	298	anti-parallel
Strand 3	B	346	350	anti-parallel
Strand 4	B	271	278	anti-parallel
Strand 5	B	368	370	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	326	332	first strand
Strand 2	B	292	298	anti-parallel
Strand 3	B	346	350	anti-parallel
Strand 4	B	271	278	anti-parallel
Strand 5	B	410	412	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	12	first strand
Strand 2	C	337	340	anti-parallel
Strand 3	C	282	289	anti-parallel
Strand 4	C	354	361	anti-parallel
Strand 5	C	260	267	anti-parallel
Strand 6	C	242	247	anti-parallel
Strand 7	C	237	239	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	17	23	first strand
Strand 2	C	26	31	anti-parallel
Strand 3	C	48	54	anti-parallel
Strand 4	C	118	126	anti-parallel
Strand 5	C	67	75	anti-parallel
Strand 6	C	97	101	anti-parallel
Strand 7	C	228	229	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	137	first strand
Strand 2	C	58	65	anti-parallel
Strand 3	C	198	200	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	137	first strand
Strand 2	C	58	65	anti-parallel
Strand 3	C	106	111	anti-parallel
Strand 4	C	78	84	anti-parallel
Strand 5	C	87	93	anti-parallel
Strand 6	C	214	215	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	326	332	first strand
Strand 2	C	292	298	anti-parallel
Strand 3	C	346	350	anti-parallel
Strand 4	C	271	278	anti-parallel
Strand 5	C	368	370	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	326	332	first strand
Strand 2	C	292	298	anti-parallel
Strand 3	C	346	350	anti-parallel
Strand 4	C	271	278	anti-parallel
Strand 5	C	410	412	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7U1H

Analysis of interatomic Contacts of Structural Units in PDB entry:
7U1H