Analysis of interatomic Contacts of Structural Units in PDB entry:
7U1T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7U1T entry

There are 6 chains in PDB entry 7U1T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 438MET 613
B
 GLY 454GLU 615
C
 PRO 438MET 613
D
 GLN 453MET 613
E
 T 1 T 59
F
 A 3 A 61
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7U1T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
475 492Right-handed alpha
Helix 2
AA2
A
513 528Right-handed alpha
Helix 3
AA3
A
568 586Right-handed alpha
Helix 4
AA4
A
587 592Right-handed alpha
Helix 5
AA5
B
475 492Right-handed alpha
Helix 6
AA6
B
513 528Right-handed alpha
Helix 7
AA7
B
568 586Right-handed alpha
Helix 8
AA8
C
475 492Right-handed alpha
Helix 9
AA9
C
513 528Right-handed alpha
Helix 10
AB1
C
568 586Right-handed alpha
Helix 11
AB2
C
588 593Right-handed 310
Helix 12
AB3
D
475 492Right-handed alpha
Helix 13
AB4
D
513 528Right-handed alpha
Helix 14
AB5
D
568 586Right-handed alpha
Helix 15
AB6
D
588 592Right-handed alpha
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There are 6 sheets in PDB entry 7U1T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
532 533first strand
Strand 2
A
560 566anti-parallel
Strand 3
A
503 511anti-parallel
Strand 4
A
593 604anti-parallel
Strand 5
B
593 604anti-parallel
Strand 6
B
503 511anti-parallel
Strand 7
B
556 566anti-parallel
Strand 8
B
532 533anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 538first strand
Strand 2
A
560 566anti-parallel
Strand 3
A
503 511anti-parallel
Strand 4
A
593 604anti-parallel
Strand 5
B
593 604anti-parallel
Strand 6
B
503 511anti-parallel
Strand 7
B
556 566anti-parallel
Strand 8
B
537 540anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
532 533first strand
Strand 2
C
560 566anti-parallel
Strand 3
C
537 538anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
532 533first strand
Strand 2
C
560 566anti-parallel
Strand 3
C
503 510anti-parallel
Strand 4
C
594 604anti-parallel
Strand 5
D
598 600anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
532 533first strand
Strand 2
D
556 566anti-parallel
Strand 3
D
537 540anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
532 533first strand
Strand 2
D
556 566anti-parallel
Strand 3
D
505 511anti-parallel
Strand 4
D
593 596anti-parallel
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