Analysis of interatomic Contacts of Structural Units in PDB entry:
7U1X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7U1X entry

There are 4 chains in PDB entry 7U1X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0LEU 247
A
 ASN 249ALA 438
B
 SER 0LEU 247
B
 ASN 249ALA 438
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 7U1X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 26Right-handed alpha
Helix 2
AA2
A
26 50Right-handed alpha
Helix 3
AA3
A
53 75Right-handed alpha
Helix 4
AA4
A
86 98Right-handed alpha
Helix 5
AA5
A
108 126Right-handed alpha
Helix 6
AA6
A
136 146Right-handed alpha
Helix 7
AA7
A
147 167Right-handed alpha
Helix 8
AA8
A
167 172Right-handed alpha
Helix 9
AA9
A
173 192Right-handed alpha
Helix 10
AB1
A
193 194Right-handed 310
Helix 11
AB2
A
195 201Right-handed 310
Helix 12
AB3
A
203 208Right-handed alpha
Helix 13
AB4
A
212 219Right-handed alpha
Helix 14
AB5
A
227 236Right-handed alpha
Helix 15
AB6
A
251 267Right-handed alpha
Helix 16
AB7
A
288 303Right-handed alpha
Helix 17
AB8
A
305 321Right-handed alpha
Helix 18
AB9
A
329 334Right-handed 310
Helix 19
AC1
A
337 339Right-handed 310
Helix 20
AC2
A
340 345Right-handed alpha
Helix 21
AC3
A
345 353Right-handed alpha
Helix 22
AC4
A
362 371Right-handed alpha
Helix 23
AC5
A
380 389Right-handed 310
Helix 24
AC6
A
411 420Right-handed alpha
Helix 25
AC7
A
422 426Right-handed 310
Helix 26
AC8
B
18 26Right-handed alpha
Helix 27
AC9
B
26 50Right-handed alpha
Helix 28
AD1
B
53 75Right-handed alpha
Helix 29
AD2
B
88 98Right-handed alpha
Helix 30
AD3
B
108 126Right-handed alpha
Helix 31
AD4
B
136 147Right-handed alpha
Helix 32
AD5
B
147 160Right-handed alpha
Helix 33
AD6
B
160 166Right-handed alpha
Helix 34
AD7
B
174 192Right-handed alpha
Helix 35
AD8
B
193 194Right-handed 310
Helix 36
AD9
B
195 201Right-handed 310
Helix 37
AE1
B
203 208Right-handed alpha
Helix 38
AE2
B
212 219Right-handed alpha
Helix 39
AE3
B
227 236Right-handed alpha
Helix 40
AE4
B
251 267Right-handed alpha
Helix 41
AE5
B
288 303Right-handed alpha
Helix 42
AE6
B
305 321Right-handed alpha
Helix 43
AE7
B
329 334Right-handed 310
Helix 44
AE8
B
337 339Right-handed 310
Helix 45
AE9
B
340 345Right-handed alpha
Helix 46
AF1
B
345 353Right-handed alpha
Helix 47
AF2
B
362 371Right-handed alpha
Helix 48
AF3
B
380 389Right-handed 310
Helix 49
AF4
B
411 420Right-handed alpha
Helix 50
AF5
B
422 426Right-handed 310
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There are 2 sheets in PDB entry 7U1X. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 225first strand
Strand 2
A
430 435parallel
Strand 3
A
394 399anti-parallel
Strand 4
A
357 361parallel
Strand 5
A
242 246parallel
Strand 6
A
272 276parallel
Strand 7
A
324 326parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 226first strand
Strand 2
B
430 435parallel
Strand 3
B
394 399anti-parallel
Strand 4
B
357 361parallel
Strand 5
B
241 246parallel
Strand 6
B
270 276parallel
Strand 7
B
324 326parallel
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