Analysis of interatomic Contacts of Structural Units in PDB entry:
7U24

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7U24 entry

There are 5 chains in PDB entry 7U24 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LEU 359
B	ARG 31	ALA 358
C	ARG 31	ALA 358
D	ARG 31	ALA 358
E	MET 1	VAL 1578

There are 96 helices in PDB entry 7U24. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	30	Right-handed alpha
Helix 2	AA2	A	53	58	Right-handed alpha
Helix 3	AA3	A	58	66	Right-handed alpha
Helix 4	AA4	A	67	98	Right-handed alpha
Helix 5	AA5	A	116	130	Right-handed alpha
Helix 6	AA6	A	142	172	Right-handed alpha
Helix 7	AA7	A	265	270	Right-handed 310
Helix 8	AA8	A	271	275	Right-handed 310
Helix 9	AA9	A	305	307	Right-handed 310
Helix 10	AB1	A	331	333	Right-handed 310
Helix 11	AB2	A	346	359	Right-handed alpha
Helix 12	AB3	B	53	58	Right-handed alpha
Helix 13	AB4	B	58	66	Right-handed alpha
Helix 14	AB5	B	67	97	Right-handed alpha
Helix 15	AB6	B	116	129	Right-handed alpha
Helix 16	AB7	B	142	172	Right-handed alpha
Helix 17	AB8	B	174	179	Right-handed alpha
Helix 18	AB9	B	271	275	Right-handed 310
Helix 19	AC1	B	305	307	Right-handed 310
Helix 20	AC2	B	331	333	Right-handed 310
Helix 21	AC3	B	346	358	Right-handed alpha
Helix 22	AC4	C	53	58	Right-handed alpha
Helix 23	AC5	C	58	66	Right-handed alpha
Helix 24	AC6	C	67	97	Right-handed alpha
Helix 25	AC7	C	116	130	Right-handed alpha
Helix 26	AC8	C	142	172	Right-handed alpha
Helix 27	AC9	C	174	179	Right-handed alpha
Helix 28	AD1	C	331	333	Right-handed 310
Helix 29	AD2	C	345	358	Right-handed alpha
Helix 30	AD3	D	53	58	Right-handed alpha
Helix 31	AD4	D	58	66	Right-handed alpha
Helix 32	AD5	D	67	98	Right-handed alpha
Helix 33	AD6	D	116	130	Right-handed alpha
Helix 34	AD7	D	142	171	Right-handed alpha
Helix 35	AD8	D	176	179	Right-handed 310
Helix 36	AD9	D	271	275	Right-handed 310
Helix 37	AE1	D	331	333	Right-handed 310
Helix 38	AE2	D	345	358	Right-handed alpha
Helix 39	AE3	E	12	16	Right-handed 310
Helix 40	AE4	E	24	57	Right-handed alpha
Helix 41	AE5	E	71	96	Right-handed alpha
Helix 42	AE6	E	97	99	Right-handed 310
Helix 43	AE7	E	107	130	Right-handed alpha
Helix 44	AE8	E	132	135	Right-handed 310
Helix 45	AE9	E	136	160	Right-handed alpha
Helix 46	AF1	E	166	194	Right-handed alpha
Helix 47	AF2	E	207	212	Right-handed alpha
Helix 48	AF3	E	223	229	Right-handed alpha
Helix 49	AF4	E	232	243	Right-handed alpha
Helix 50	AF5	E	254	257	Right-handed 310
Helix 51	AF6	E	258	277	Right-handed alpha
Helix 52	AF7	E	283	314	Right-handed alpha
Helix 53	AF8	E	316	327	Right-handed alpha
Helix 54	AF9	E	328	332	Right-handed 310
Helix 55	AG1	E	347	352	Right-handed alpha
Helix 56	AG2	E	354	400	Right-handed alpha
Helix 57	AG3	E	413	434	Right-handed alpha
Helix 58	AG4	E	434	456	Right-handed alpha
Helix 59	AG5	E	457	469	Right-handed alpha
Helix 60	AG6	E	470	505	Right-handed alpha
Helix 61	AG7	E	505	512	Right-handed alpha
Helix 62	AG8	E	515	564	Right-handed alpha
Helix 63	AG9	E	572	615	Right-handed alpha
Helix 64	AH1	E	719	728	Right-handed alpha
Helix 65	AH2	E	783	790	Right-handed alpha
Helix 66	AH3	E	795	806	Right-handed alpha
Helix 67	AH4	E	808	814	Right-handed alpha
Helix 68	AH5	E	831	846	Right-handed alpha
Helix 69	AH6	E	855	860	Right-handed alpha
Helix 70	AH7	E	862	881	Right-handed alpha
Helix 71	AH8	E	893	898	Right-handed alpha
Helix 72	AH9	E	915	919	Right-handed 310
Helix 73	AI1	E	987	993	Right-handed alpha
Helix 74	AI2	E	1000	1009	Right-handed alpha
Helix 75	AI3	E	1009	1043	Right-handed alpha
Helix 76	AI4	E	1061	1107	Right-handed alpha
Helix 77	AI5	E	1109	1116	Right-handed alpha
Helix 78	AI6	E	1117	1135	Right-handed alpha
Helix 79	AI7	E	1135	1161	Right-handed alpha
Helix 80	AI8	E	1163	1210	Right-handed alpha
Helix 81	AI9	E	1210	1217	Right-handed alpha
Helix 82	AJ1	E	1219	1274	Right-handed alpha
Helix 83	AJ2	E	1278	1290	Right-handed alpha
Helix 84	AJ3	E	1291	1320	Right-handed alpha
Helix 85	AJ4	E	1385	1392	Right-handed alpha
Helix 86	AJ5	E	1411	1413	Right-handed 310
Helix 87	AJ6	E	1414	1419	Right-handed alpha
Helix 88	AJ7	E	1436	1441	Right-handed alpha
Helix 89	AJ8	E	1450	1459	Right-handed alpha
Helix 90	AJ9	E	1460	1467	Right-handed alpha
Helix 91	AK1	E	1476	1479	Right-handed 310
Helix 92	AK2	E	1484	1498	Right-handed alpha
Helix 93	AK3	E	1512	1531	Right-handed alpha
Helix 94	AK4	E	1539	1543	Right-handed 310
Helix 95	AK5	E	1563	1570	Right-handed alpha
Helix 96	AK6	E	1571	1578	Right-handed alpha

There are 37 sheets in PDB entry 7U24. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	47	first strand
Strand 2	B	326	329	parallel
Strand 3	B	319	321	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	183	first strand
Strand 2	A	201	204	anti-parallel
Strand 3	A	255	256	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	260	first strand
Strand 2	A	195	198	anti-parallel
Strand 3	A	187	192	anti-parallel
Strand 4	A	309	311	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	211	first strand
Strand 2	A	282	291	anti-parallel
Strand 3	A	215	220	anti-parallel
Strand 4	A	236	237	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	211	first strand
Strand 2	A	282	291	anti-parallel
Strand 3	A	297	302	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	315	first strand
Strand 2	A	336	338	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	319	320	first strand
Strand 2	A	326	329	anti-parallel
Strand 3	D	44	47	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	37	first strand
Strand 2	B	40	42	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	47	first strand
Strand 2	C	326	329	parallel
Strand 3	C	319	321	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	183	first strand
Strand 2	B	201	204	anti-parallel
Strand 3	B	255	256	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	260	first strand
Strand 2	B	195	198	anti-parallel
Strand 3	B	187	192	anti-parallel
Strand 4	B	309	311	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	210	211	first strand
Strand 2	B	290	291	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	230	237	first strand
Strand 2	B	215	224	anti-parallel
Strand 3	B	283	287	anti-parallel
Strand 4	B	300	302	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	315	first strand
Strand 2	B	336	338	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	37	first strand
Strand 2	C	40	42	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	47	first strand
Strand 2	D	326	329	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	183	first strand
Strand 2	C	201	204	anti-parallel
Strand 3	C	255	256	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	259	260	first strand
Strand 2	C	195	199	anti-parallel
Strand 3	C	187	192	anti-parallel
Strand 4	C	309	311	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	211	first strand
Strand 2	C	282	291	anti-parallel
Strand 3	C	215	224	anti-parallel
Strand 4	C	230	237	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	211	first strand
Strand 2	C	282	291	anti-parallel
Strand 3	C	297	302	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	315	first strand
Strand 2	C	336	338	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	37	first strand
Strand 2	D	40	42	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	183	first strand
Strand 2	D	201	204	anti-parallel
Strand 3	D	255	256	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	259	260	first strand
Strand 2	D	195	198	anti-parallel
Strand 3	D	187	192	anti-parallel
Strand 4	D	309	311	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	210	211	first strand
Strand 2	D	283	291	anti-parallel
Strand 3	D	215	224	anti-parallel
Strand 4	D	230	237	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	210	211	first strand
Strand 2	D	283	291	anti-parallel
Strand 3	D	297	302	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	313	315	first strand
Strand 2	D	336	338	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	340	first strand
Strand 2	E	343	344	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	679	680	first strand
Strand 2	E	702	703	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	685	686	first strand
Strand 2	E	696	697	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	708	711	first strand
Strand 2	E	884	887	parallel
Strand 3	E	852	854	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	901	904	first strand
Strand 2	E	907	911	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1347	1348	first strand
Strand 2	E	1402	1405	anti-parallel
Strand 3	E	1408	1409	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1352	1353	first strand
Strand 2	E	1397	1398	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1423	1424	first strand
Strand 2	E	1503	1505	parallel
Strand 3	E	1534	1535	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1434	1435	first strand
Strand 2	E	1474	1475	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1549	1552	first strand
Strand 2	E	1557	1561	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7U24

Analysis of interatomic Contacts of Structural Units in PDB entry:
7U24