Analysis of interatomic Contacts of Structural Units in PDB entry:
7U35


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7U35 entry

There are 3 chains in PDB entry 7U35 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 8ALA 448
B
 HIS 7ALA 448
C
 HIS 8ALA 448
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 7U35. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 29Right-handed alpha
Helix 2
AA2
A
44 52Right-handed alpha
Helix 3
AA3
A
63 68Right-handed alpha
Helix 4
AA4
A
83 92Right-handed alpha
Helix 5
AA5
A
98 107Right-handed alpha
Helix 6
AA6
A
119 134Right-handed alpha
Helix 7
AA7
A
147 152Right-handed 310
Helix 8
AA8
A
164 170Right-handed alpha
Helix 9
AA9
A
201 207Right-handed 310
Helix 10
AB1
A
218 222Right-handed 310
Helix 11
AB2
A
223 228Right-handed 310
Helix 12
AB3
A
266 268Right-handed 310
Helix 13
AB4
A
272 289Right-handed alpha
Helix 14
AB5
A
292 303Right-handed alpha
Helix 15
AB6
A
329 342Right-handed alpha
Helix 16
AB7
A
361 363Right-handed 310
Helix 17
AB8
A
364 371Right-handed alpha
Helix 18
AB9
A
381 390Right-handed alpha
Helix 19
AC1
A
400 412Right-handed alpha
Helix 20
AC2
A
432 447Right-handed alpha
Helix 21
AC3
B
16 29Right-handed alpha
Helix 22
AC4
B
44 52Right-handed alpha
Helix 23
AC5
B
63 69Right-handed alpha
Helix 24
AC6
B
83 92Right-handed alpha
Helix 25
AC7
B
98 107Right-handed alpha
Helix 26
AC8
B
119 134Right-handed alpha
Helix 27
AC9
B
147 152Right-handed alpha
Helix 28
AD1
B
165 169Right-handed 310
Helix 29
AD2
B
197 203Right-handed alpha
Helix 30
AD3
B
204 207Right-handed 310
Helix 31
AD4
B
218 222Right-handed 310
Helix 32
AD5
B
223 228Right-handed 310
Helix 33
AD6
B
266 268Right-handed 310
Helix 34
AD7
B
272 289Right-handed alpha
Helix 35
AD8
B
292 303Right-handed alpha
Helix 36
AD9
B
329 342Right-handed alpha
Helix 37
AE1
B
361 363Right-handed 310
Helix 38
AE2
B
364 371Right-handed alpha
Helix 39
AE3
B
381 390Right-handed alpha
Helix 40
AE4
B
400 412Right-handed alpha
Helix 41
AE5
B
432 447Right-handed alpha
Helix 42
AE6
C
16 29Right-handed alpha
Helix 43
AE7
C
44 52Right-handed alpha
Helix 44
AE8
C
63 69Right-handed alpha
Helix 45
AE9
C
83 93Right-handed alpha
Helix 46
AF1
C
98 107Right-handed alpha
Helix 47
AF2
C
119 134Right-handed alpha
Helix 48
AF3
C
147 152Right-handed alpha
Helix 49
AF4
C
164 169Right-handed alpha
Helix 50
AF5
C
201 207Right-handed 310
Helix 51
AF6
C
218 222Right-handed 310
Helix 52
AF7
C
223 228Right-handed 310
Helix 53
AF8
C
266 268Right-handed 310
Helix 54
AF9
C
272 289Right-handed alpha
Helix 55
AG1
C
292 303Right-handed alpha
Helix 56
AG2
C
329 342Right-handed alpha
Helix 57
AG3
C
361 363Right-handed 310
Helix 58
AG4
C
364 371Right-handed alpha
Helix 59
AG5
C
381 390Right-handed alpha
Helix 60
AG6
C
400 412Right-handed alpha
Helix 61
AG7
C
432 447Right-handed alpha
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There are 9 sheets in PDB entry 7U35. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
33 37parallel
Strand 3
A
10 13parallel
Strand 4
A
72 75parallel
Strand 5
A
95 97parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 141first strand
Strand 2
A
158 162parallel
Strand 3
A
111 115parallel
Strand 4
A
178 181parallel
Strand 5
A
212 215parallel
Strand 6
A
231 234parallel
Strand 7
A
243 249parallel
Strand 8
A
252 257anti-parallel
Strand 9
A
260 264anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 316first strand
Strand 2
A
319 323anti-parallel
Strand 3
A
417 420parallel
Strand 4
A
348 353parallel
Strand 5
A
372 378parallel
Strand 6
A
395 397parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 59first strand
Strand 2
B
34 37parallel
Strand 3
B
10 13parallel
Strand 4
B
72 75parallel
Strand 5
B
95 97parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 142first strand
Strand 2
B
158 162parallel
Strand 3
B
111 115parallel
Strand 4
B
178 181parallel
Strand 5
B
212 215parallel
Strand 6
B
231 234parallel
Strand 7
B
243 248parallel
Strand 8
B
253 257anti-parallel
Strand 9
B
260 264anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
311 316first strand
Strand 2
B
319 323anti-parallel
Strand 3
B
417 420parallel
Strand 4
B
348 353parallel
Strand 5
B
372 378parallel
Strand 6
B
395 397parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 59first strand
Strand 2
C
33 37parallel
Strand 3
C
10 13parallel
Strand 4
C
72 75parallel
Strand 5
C
95 97parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
138 142first strand
Strand 2
C
158 162parallel
Strand 3
C
111 115parallel
Strand 4
C
178 181parallel
Strand 5
C
212 215parallel
Strand 6
C
231 234parallel
Strand 7
C
243 249parallel
Strand 8
C
252 257anti-parallel
Strand 9
C
260 264anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
311 316first strand
Strand 2
C
319 323anti-parallel
Strand 3
C
417 420parallel
Strand 4
C
348 353parallel
Strand 5
C
372 378parallel
Strand 6
C
395 397parallel
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