Analysis of interatomic Contacts of Structural Units in PDB entry:
7U58


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7U58 entry

There are 2 chains in PDB entry 7U58 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 82ILE 781
B
 TRP 91ILE 781
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 7U58. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
84 93Right-handed alpha
Helix 2
AA2
A
97 105Right-handed alpha
Helix 3
AA3
A
120 130Right-handed alpha
Helix 4
AA4
A
159 173Right-handed alpha
Helix 5
AA5
A
199 211Right-handed alpha
Helix 6
AA6
A
265 284Right-handed alpha
Helix 7
AA7
A
325 333Right-handed alpha
Helix 8
AA8
A
354 362Right-handed alpha
Helix 9
AA9
A
363 366Right-handed 310
Helix 10
AB1
A
402 407Right-handed alpha
Helix 11
AB2
A
428 437Right-handed alpha
Helix 12
AB3
A
449 454Right-handed alpha
Helix 13
AB4
A
455 457Right-handed 310
Helix 14
AB5
A
460 465Right-handed alpha
Helix 15
AB6
A
467 473Right-handed alpha
Helix 16
AB7
A
473 480Right-handed alpha
Helix 17
AB8
A
516 518Right-handed 310
Helix 18
AB9
A
543 568Right-handed alpha
Helix 19
AC1
A
575 580Right-handed 310
Helix 20
AC2
A
581 594Right-handed alpha
Helix 21
AC3
A
635 651Right-handed alpha
Helix 22
AC4
A
663 672Right-handed alpha
Helix 23
AC5
A
678 682Right-handed 310
Helix 24
AC6
A
691 695Right-handed 310
Helix 25
AC7
A
702 717Right-handed alpha
Helix 26
AC8
A
752 762Right-handed alpha
Helix 27
AC9
A
770 774Right-handed 310
Helix 28
AD1
B
99 106Right-handed alpha
Helix 29
AD2
B
120 130Right-handed alpha
Helix 30
AD3
B
160 173Right-handed alpha
Helix 31
AD4
B
199 211Right-handed alpha
Helix 32
AD5
B
265 284Right-handed alpha
Helix 33
AD6
B
325 333Right-handed alpha
Helix 34
AD7
B
354 362Right-handed alpha
Helix 35
AD8
B
363 366Right-handed 310
Helix 36
AD9
B
402 409Right-handed alpha
Helix 37
AE1
B
422 437Right-handed alpha
Helix 38
AE2
B
449 454Right-handed alpha
Helix 39
AE3
B
455 457Right-handed 310
Helix 40
AE4
B
459 465Right-handed alpha
Helix 41
AE5
B
467 473Right-handed alpha
Helix 42
AE6
B
473 481Right-handed alpha
Helix 43
AE7
B
516 518Right-handed 310
Helix 44
AE8
B
543 567Right-handed alpha
Helix 45
AE9
B
575 580Right-handed 310
Helix 46
AF1
B
581 594Right-handed alpha
Helix 47
AF2
B
635 652Right-handed alpha
Helix 48
AF3
B
658 662Right-handed 310
Helix 49
AF4
B
663 673Right-handed alpha
Helix 50
AF5
B
678 682Right-handed 310
Helix 51
AF6
B
691 695Right-handed 310
Helix 52
AF7
B
702 717Right-handed alpha
Helix 53
AF8
B
752 762Right-handed alpha
Helix 54
AF9
B
770 774Right-handed 310
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There are 11 sheets in PDB entry 7U58. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 136first strand
Strand 2
A
109 114parallel
Strand 3
A
148 153parallel
Strand 4
A
176 179parallel
Strand 5
A
191 192anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 187first strand
Strand 2
A
296 301anti-parallel
Strand 3
A
306 311anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 391first strand
Strand 2
A
417 419anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 448first strand
Strand 2
A
497 504anti-parallel
Strand 3
A
509 514anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 448first strand
Strand 2
A
497 504anti-parallel
Strand 3
A
722 725anti-parallel
Strand 4
A
734 739anti-parallel
Strand 5
A
538 541anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
596 602first strand
Strand 2
A
611 618anti-parallel
Strand 3
A
627 632anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 136first strand
Strand 2
B
109 114parallel
Strand 3
B
148 153parallel
Strand 4
B
176 179parallel
Strand 5
B
191 192anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 187first strand
Strand 2
B
296 301anti-parallel
Strand 3
B
306 311anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
446 448first strand
Strand 2
B
497 504anti-parallel
Strand 3
B
509 514anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
446 448first strand
Strand 2
B
497 504anti-parallel
Strand 3
B
722 725anti-parallel
Strand 4
B
734 739anti-parallel
Strand 5
B
538 541anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
596 602first strand
Strand 2
B
611 618anti-parallel
Strand 3
B
627 632anti-parallel
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