Analysis of interatomic Contacts of Structural Units in PDB entry:
7U5E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7U5E entry

There are 13 chains in PDB entry 7U5E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	C 1	G 60
2	C 5	A 37
3	T 1	C 7
A	ASP 20	ASN 689
B	LEU 3	GLY 344
C	LEU 3	GLY 344
D	LEU 3	GLY 344
E	LEU 3	GLY 344
F	LEU 3	GLY 344
G	LEU 3	GLY 344
H	ASN 4	LEU 205
I	PRO 7	HIS 400
J	VAL 5	GLN 397

There are131 helices in PDB entry 7U5E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	27	Right-handed alpha
Helix 2	AA2	A	39	50	Right-handed alpha
Helix 3	AA3	A	51	52	Right-handed 310
Helix 4	AA4	A	53	57	Right-handed 310
Helix 5	AA5	A	62	71	Right-handed alpha
Helix 6	AA6	A	72	82	Right-handed alpha
Helix 7	AA7	A	116	120	Right-handed 310
Helix 8	AA8	A	136	141	Right-handed alpha
Helix 9	AA9	A	152	158	Right-handed alpha
Helix 10	AB1	A	160	170	Right-handed alpha
Helix 11	AB2	A	173	187	Right-handed alpha
Helix 12	AB3	A	221	234	Right-handed alpha
Helix 13	AB4	A	245	249	Right-handed 310
Helix 14	AB5	A	250	256	Right-handed alpha
Helix 15	AB6	A	463	480	Right-handed alpha
Helix 16	AB7	A	552	563	Right-handed alpha
Helix 17	AB8	A	576	580	Right-handed 310
Helix 18	AB9	A	589	598	Right-handed alpha
Helix 19	AC1	A	616	627	Right-handed alpha
Helix 20	AC2	A	668	676	Right-handed alpha
Helix 21	AC3	A	676	684	Right-handed alpha
Helix 22	AC4	B	60	65	Right-handed 310
Helix 23	AC5	B	104	120	Right-handed alpha
Helix 24	AC6	B	123	138	Right-handed alpha
Helix 25	AC7	B	139	145	Right-handed 310
Helix 26	AC8	B	166	170	Right-handed 310
Helix 27	AC9	B	180	195	Right-handed alpha
Helix 28	AD1	B	253	262	Right-handed alpha
Helix 29	AD2	B	267	271	Right-handed 310
Helix 30	AD3	B	293	297	Right-handed 310
Helix 31	AD4	B	299	304	Right-handed alpha
Helix 32	AD5	B	306	317	Right-handed alpha
Helix 33	AD6	B	325	337	Right-handed alpha
Helix 34	AD7	C	60	65	Right-handed 310
Helix 35	AD8	C	104	120	Right-handed alpha
Helix 36	AD9	C	123	138	Right-handed alpha
Helix 37	AE1	C	139	142	Right-handed 310
Helix 38	AE2	C	180	195	Right-handed alpha
Helix 39	AE3	C	253	262	Right-handed alpha
Helix 40	AE4	C	293	297	Right-handed 310
Helix 41	AE5	C	299	305	Right-handed alpha
Helix 42	AE6	C	306	317	Right-handed alpha
Helix 43	AE7	C	325	337	Right-handed alpha
Helix 44	AE8	D	60	65	Right-handed 310
Helix 45	AE9	D	104	122	Right-handed alpha
Helix 46	AF1	D	123	138	Right-handed alpha
Helix 47	AF2	D	139	145	Right-handed 310
Helix 48	AF3	D	180	195	Right-handed alpha
Helix 49	AF4	D	253	262	Right-handed alpha
Helix 50	AF5	D	293	297	Right-handed 310
Helix 51	AF6	D	299	305	Right-handed alpha
Helix 52	AF7	D	306	317	Right-handed alpha
Helix 53	AF8	D	325	337	Right-handed alpha
Helix 54	AF9	E	60	65	Right-handed 310
Helix 55	AG1	E	104	120	Right-handed alpha
Helix 56	AG2	E	123	138	Right-handed alpha
Helix 57	AG3	E	139	145	Right-handed 310
Helix 58	AG4	E	180	195	Right-handed alpha
Helix 59	AG5	E	253	262	Right-handed alpha
Helix 60	AG6	E	293	297	Right-handed 310
Helix 61	AG7	E	299	305	Right-handed alpha
Helix 62	AG8	E	306	317	Right-handed alpha
Helix 63	AG9	E	325	337	Right-handed alpha
Helix 64	AH1	F	60	65	Right-handed 310
Helix 65	AH2	F	104	120	Right-handed alpha
Helix 66	AH3	F	123	138	Right-handed alpha
Helix 67	AH4	F	139	145	Right-handed 310
Helix 68	AH5	F	180	195	Right-handed alpha
Helix 69	AH6	F	253	262	Right-handed alpha
Helix 70	AH7	F	293	297	Right-handed 310
Helix 71	AH8	F	299	305	Right-handed alpha
Helix 72	AH9	F	306	317	Right-handed alpha
Helix 73	AI1	F	325	337	Right-handed alpha
Helix 74	AI2	G	104	120	Right-handed alpha
Helix 75	AI3	G	123	138	Right-handed alpha
Helix 76	AI4	G	139	145	Right-handed 310
Helix 77	AI5	G	166	170	Right-handed 310
Helix 78	AI6	G	180	195	Right-handed alpha
Helix 79	AI7	G	253	262	Right-handed alpha
Helix 80	AI8	G	293	297	Right-handed 310
Helix 81	AI9	G	299	305	Right-handed alpha
Helix 82	AJ1	G	306	317	Right-handed alpha
Helix 83	AJ2	G	325	337	Right-handed alpha
Helix 84	AJ3	H	18	37	Right-handed alpha
Helix 85	AJ4	H	64	73	Right-handed alpha
Helix 86	AJ5	H	74	83	Right-handed alpha
Helix 87	AJ6	H	106	112	Right-handed 310
Helix 88	AJ7	H	113	132	Right-handed alpha
Helix 89	AJ8	I	14	26	Right-handed alpha
Helix 90	AJ9	I	30	46	Right-handed alpha
Helix 91	AK1	I	46	52	Right-handed alpha
Helix 92	AK2	I	57	65	Right-handed 310
Helix 93	AK3	I	68	83	Right-handed alpha
Helix 94	AK4	I	119	121	Right-handed 310
Helix 95	AK5	I	129	134	Right-handed alpha
Helix 96	AK6	I	198	203	Right-handed alpha
Helix 97	AK7	I	221	237	Right-handed alpha
Helix 98	AK8	I	246	251	Right-handed alpha
Helix 99	AK9	I	251	256	Right-handed alpha
Helix 100	AL1	I	257	261	Right-handed 310
Helix 101	AL2	I	262	276	Right-handed alpha
Helix 102	AL3	I	281	285	Right-handed 310
Helix 103	AL4	I	286	292	Right-handed alpha
Helix 104	AL5	I	295	300	Right-handed 310
Helix 105	AL6	I	309	325	Right-handed alpha
Helix 106	AL7	I	341	348	Right-handed alpha
Helix 107	AL8	I	351	361	Right-handed alpha
Helix 108	AL9	I	385	396	Right-handed alpha
Helix 109	AM1	J	14	25	Right-handed alpha
Helix 110	AM2	J	30	43	Right-handed alpha
Helix 111	AM3	J	46	51	Right-handed alpha
Helix 112	AM4	J	56	60	Right-handed 310
Helix 113	AM5	J	61	65	Right-handed 310
Helix 114	AM6	J	68	83	Right-handed alpha
Helix 115	AM7	J	89	94	Right-handed 310
Helix 116	AM8	J	99	102	Right-handed 310
Helix 117	AM9	J	119	121	Right-handed 310
Helix 118	AN1	J	129	134	Right-handed alpha
Helix 119	AN2	J	140	145	Right-handed 310
Helix 120	AN3	J	199	204	Right-handed alpha
Helix 121	AN4	J	205	207	Right-handed 310
Helix 122	AN5	J	221	236	Right-handed alpha
Helix 123	AN6	J	247	256	Right-handed alpha
Helix 124	AN7	J	258	277	Right-handed alpha
Helix 125	AN8	J	281	285	Right-handed 310
Helix 126	AN9	J	286	292	Right-handed alpha
Helix 127	AO1	J	295	300	Right-handed 310
Helix 128	AO2	J	309	325	Right-handed alpha
Helix 129	AO3	J	340	348	Right-handed alpha
Helix 130	AO4	J	351	361	Right-handed alpha
Helix 131	AO5	J	385	396	Right-handed alpha

There are 47 sheets in PDB entry 7U5E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	87	first strand
Strand 2	A	125	126	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	90	first strand
Strand 2	A	219	220	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	142	145	first strand
Strand 2	A	148	151	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	208	first strand
Strand 2	A	211	217	anti-parallel
Strand 3	A	654	667	parallel
Strand 4	A	605	609	anti-parallel
Strand 5	A	487	501	anti-parallel
Strand 6	A	531	543	anti-parallel
Strand 7	A	440	451	anti-parallel
Strand 8	A	570	573	anti-parallel
Strand 9	A	566	567	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	208	first strand
Strand 2	A	211	217	anti-parallel
Strand 3	A	654	667	parallel
Strand 4	A	630	639	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	238	242	first strand
Strand 2	A	259	264	anti-parallel
Strand 3	A	458	459	parallel
Strand 4	A	453	455	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	511	512	first strand
Strand 2	A	521	522	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	7	8	first strand
Strand 2	B	101	102	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	15	first strand
Strand 2	B	83	92	anti-parallel
Strand 3	B	18	22	anti-parallel
Strand 4	B	203	211	first strand
Strand 5	B	150	156	anti-parallel
Strand 6	B	161	164	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	31	first strand
Strand 2	B	18	22	anti-parallel
Strand 3	B	83	92	anti-parallel
Strand 4	B	248	252	first strand
Strand 5	B	240	242	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	41	first strand
Strand 2	B	68	74	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	51	first strand
Strand 2	B	55	56	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	265	first strand
Strand 2	B	276	277	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	283	284	first strand
Strand 2	B	289	290	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	7	8	first strand
Strand 2	C	101	102	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	15	first strand
Strand 2	C	83	92	anti-parallel
Strand 3	C	18	22	anti-parallel
Strand 4	C	203	211	first strand
Strand 5	C	150	156	anti-parallel
Strand 6	C	161	164	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	31	first strand
Strand 2	C	18	22	anti-parallel
Strand 3	C	83	92	anti-parallel
Strand 4	C	248	252	first strand
Strand 5	C	240	242	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	41	first strand
Strand 2	C	68	74	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	283	284	first strand
Strand 2	C	289	290	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	7	8	first strand
Strand 2	D	101	102	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	13	15	first strand
Strand 2	D	83	92	anti-parallel
Strand 3	D	18	22	anti-parallel
Strand 4	D	202	211	first strand
Strand 5	D	150	156	anti-parallel
Strand 6	D	161	164	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	31	first strand
Strand 2	D	18	22	anti-parallel
Strand 3	D	83	92	anti-parallel
Strand 4	D	248	252	first strand
Strand 5	D	240	242	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	41	first strand
Strand 2	D	68	74	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	283	284	first strand
Strand 2	D	289	290	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	7	8	first strand
Strand 2	E	101	102	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	13	15	first strand
Strand 2	E	83	92	anti-parallel
Strand 3	E	18	22	anti-parallel
Strand 4	E	202	211	first strand
Strand 5	E	150	155	anti-parallel
Strand 6	E	161	164	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	30	31	first strand
Strand 2	E	18	22	anti-parallel
Strand 3	E	83	92	anti-parallel
Strand 4	E	248	252	first strand
Strand 5	E	240	242	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	41	first strand
Strand 2	E	68	74	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	283	284	first strand
Strand 2	E	289	290	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	7	8	first strand
Strand 2	F	101	102	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	13	15	first strand
Strand 2	F	84	92	anti-parallel
Strand 3	F	18	22	anti-parallel
Strand 4	F	202	210	first strand
Strand 5	F	150	156	anti-parallel
Strand 6	F	161	164	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	30	31	first strand
Strand 2	F	18	22	anti-parallel
Strand 3	F	84	92	anti-parallel
Strand 4	F	248	252	first strand
Strand 5	F	240	242	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	41	first strand
Strand 2	F	68	74	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	283	284	first strand
Strand 2	F	289	290	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	7	8	first strand
Strand 2	G	101	102	anti-parallel

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There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	13	15	first strand
Strand 2	G	83	92	anti-parallel
Strand 3	G	18	22	anti-parallel
Strand 4	G	202	211	first strand
Strand 5	G	150	156	anti-parallel
Strand 6	G	161	164	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	30	31	first strand
Strand 2	G	18	22	anti-parallel
Strand 3	G	83	92	anti-parallel
Strand 4	G	248	252	first strand
Strand 5	G	240	242	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	72	74	first strand
Strand 2	G	35	37	anti-parallel
Strand 3	H	143	144	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	283	284	first strand
Strand 2	G	289	290	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	43	45	first strand
Strand 2	H	57	62	anti-parallel
Strand 3	H	6	12	anti-parallel
Strand 4	H	86	88	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	43	45	first strand
Strand 2	H	57	62	anti-parallel
Strand 3	H	6	12	anti-parallel
Strand 4	H	92	93	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	100	101	first strand
Strand 2	H	195	196	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	150	155	first strand
Strand 2	H	162	167	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	96	97	first strand
Strand 2	I	108	111	anti-parallel
Strand 3	I	114	117	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	338	340	first strand
Strand 2	I	381	384	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	96	97	first strand
Strand 2	J	108	111	anti-parallel
Strand 3	J	114	117	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	338	339	first strand
Strand 2	J	383	384	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7U5E

Analysis of interatomic Contacts of Structural Units in PDB entry:
7U5E