Analysis of interatomic Contacts of Structural Units in PDB entry:
7U5M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7U5M entry

There are 4 chains in PDB entry 7U5M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2GLU 333
B
 VAL 2GLU 333
C
 VAL 2GLU 333
D
 VAL 2GLU 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 7U5M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 24Right-handed alpha
Helix 2
AA2
A
37 47Right-handed alpha
Helix 3
AA3
A
79 83Right-handed 310
Helix 4
AA4
A
84 89Right-handed alpha
Helix 5
AA5
A
102 112Right-handed alpha
Helix 6
AA6
A
134 138Right-handed 310
Helix 7
AA7
A
149 166Right-handed alpha
Helix 8
AA8
A
193 198Right-handed 310
Helix 9
AA9
A
210 219Right-handed alpha
Helix 10
AB1
A
220 223Right-handed 310
Helix 11
AB2
A
252 266Right-handed alpha
Helix 12
AB3
A
280 285Right-handed 310
Helix 13
AB4
A
315 332Right-handed alpha
Helix 14
AB5
B
10 24Right-handed alpha
Helix 15
AB6
B
37 47Right-handed alpha
Helix 16
AB7
B
79 83Right-handed 310
Helix 17
AB8
B
84 89Right-handed alpha
Helix 18
AB9
B
102 112Right-handed alpha
Helix 19
AC1
B
134 138Right-handed 310
Helix 20
AC2
B
149 166Right-handed alpha
Helix 21
AC3
B
193 198Right-handed 310
Helix 22
AC4
B
210 219Right-handed alpha
Helix 23
AC5
B
220 223Right-handed 310
Helix 24
AC6
B
252 266Right-handed alpha
Helix 25
AC7
B
280 285Right-handed 310
Helix 26
AC8
B
315 332Right-handed alpha
Helix 27
AC9
C
10 24Right-handed alpha
Helix 28
AD1
C
37 47Right-handed alpha
Helix 29
AD2
C
79 83Right-handed 310
Helix 30
AD3
C
84 89Right-handed alpha
Helix 31
AD4
C
102 112Right-handed alpha
Helix 32
AD5
C
134 138Right-handed 310
Helix 33
AD6
C
149 166Right-handed alpha
Helix 34
AD7
C
193 198Right-handed 310
Helix 35
AD8
C
210 219Right-handed alpha
Helix 36
AD9
C
220 223Right-handed 310
Helix 37
AE1
C
252 266Right-handed alpha
Helix 38
AE2
C
280 285Right-handed 310
Helix 39
AE3
C
315 332Right-handed alpha
Helix 40
AE4
D
10 24Right-handed alpha
Helix 41
AE5
D
37 47Right-handed alpha
Helix 42
AE6
D
79 83Right-handed 310
Helix 43
AE7
D
84 89Right-handed alpha
Helix 44
AE8
D
102 112Right-handed alpha
Helix 45
AE9
D
134 138Right-handed 310
Helix 46
AF1
D
149 166Right-handed alpha
Helix 47
AF2
D
193 198Right-handed 310
Helix 48
AF3
D
210 219Right-handed alpha
Helix 49
AF4
D
220 223Right-handed 310
Helix 50
AF5
D
252 266Right-handed alpha
Helix 51
AF6
D
280 285Right-handed 310
Helix 52
AF7
D
315 332Right-handed alpha
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There are 8 sheets in PDB entry 7U5M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 61first strand
Strand 2
A
64 67anti-parallel
Strand 3
A
70 75anti-parallel
Strand 4
A
27 32parallel
Strand 5
A
3 7parallel
Strand 6
A
92 95parallel
Strand 7
A
116 119parallel
Strand 8
A
144 146parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 208first strand
Strand 2
A
226 232anti-parallel
Strand 3
A
168 177parallel
Strand 4
A
238 247anti-parallel
Strand 5
A
305 313anti-parallel
Strand 6
A
291 302anti-parallel
Strand 7
A
272 275parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 61first strand
Strand 2
B
64 67anti-parallel
Strand 3
B
70 75anti-parallel
Strand 4
B
27 32parallel
Strand 5
B
3 7parallel
Strand 6
B
92 95parallel
Strand 7
B
116 119parallel
Strand 8
B
144 146parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
205 208first strand
Strand 2
B
226 232anti-parallel
Strand 3
B
168 177parallel
Strand 4
B
238 247anti-parallel
Strand 5
B
305 313anti-parallel
Strand 6
B
291 302anti-parallel
Strand 7
B
272 275parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 61first strand
Strand 2
C
64 67anti-parallel
Strand 3
C
70 75anti-parallel
Strand 4
C
27 32parallel
Strand 5
C
3 7parallel
Strand 6
C
92 95parallel
Strand 7
C
116 119parallel
Strand 8
C
144 146parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
205 208first strand
Strand 2
C
226 232anti-parallel
Strand 3
C
168 177parallel
Strand 4
C
238 247anti-parallel
Strand 5
C
305 313anti-parallel
Strand 6
C
291 302anti-parallel
Strand 7
C
272 275parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
58 61first strand
Strand 2
D
64 67anti-parallel
Strand 3
D
70 75anti-parallel
Strand 4
D
27 32parallel
Strand 5
D
3 7parallel
Strand 6
D
92 95parallel
Strand 7
D
116 119parallel
Strand 8
D
144 146parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
205 208first strand
Strand 2
D
226 232anti-parallel
Strand 3
D
168 177parallel
Strand 4
D
238 247anti-parallel
Strand 5
D
305 313anti-parallel
Strand 6
D
291 302anti-parallel
Strand 7
D
272 275parallel
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