Analysis of interatomic Contacts of Structural Units in PDB entry:
7U5S

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7U5S entry

There is 1 chain in PDB entry 7U5S (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	GLY 1352

There are141 helices in PDB entry 7U5S. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	32	Right-handed alpha
Helix 2	AA2	A	43	47	Right-handed alpha
Helix 3	AA3	A	48	60	Right-handed alpha
Helix 4	AA4	A	61	66	Right-handed alpha
Helix 5	AA5	A	84	95	Right-handed alpha
Helix 6	AA6	A	111	123	Right-handed alpha
Helix 7	AA7	A	124	128	Right-handed 310
Helix 8	AA8	A	137	143	Right-handed alpha
Helix 9	AA9	A	175	178	Right-handed 310
Helix 10	AB1	A	181	187	Right-handed alpha
Helix 11	AB2	A	188	196	Right-handed alpha
Helix 12	AB3	A	201	219	Right-handed alpha
Helix 13	AB4	A	226	248	Right-handed alpha
Helix 14	AB5	A	256	262	Right-handed 310
Helix 15	AB6	A	265	274	Right-handed alpha
Helix 16	AB7	A	279	298	Right-handed alpha
Helix 17	AB8	A	302	317	Right-handed alpha
Helix 18	AB9	A	326	332	Right-handed alpha
Helix 19	AC1	A	333	338	Right-handed 310
Helix 20	AC2	A	339	346	Right-handed alpha
Helix 21	AC3	A	378	386	Right-handed alpha
Helix 22	AC4	A	409	423	Right-handed alpha
Helix 23	AC5	A	435	448	Right-handed alpha
Helix 24	AC6	A	483	496	Right-handed alpha
Helix 25	AC7	A	513	517	Right-handed 310
Helix 26	AC8	A	519	529	Right-handed alpha
Helix 27	AC9	A	564	575	Right-handed alpha
Helix 28	AD1	A	576	578	Right-handed 310
Helix 29	AD2	A	593	607	Right-handed alpha
Helix 30	AD3	A	643	650	Right-handed alpha
Helix 31	AD4	A	668	671	Right-handed 310
Helix 32	AD5	A	672	677	Right-handed alpha
Helix 33	AD6	A	716	725	Right-handed alpha
Helix 34	AD7	A	738	742	Right-handed 310
Helix 35	AD8	A	747	760	Right-handed alpha
Helix 36	AD9	A	796	806	Right-handed alpha
Helix 37	AE1	A	807	809	Right-handed 310
Helix 38	AE2	A	817	823	Right-handed 310
Helix 39	AE3	A	827	835	Right-handed alpha
Helix 40	AE4	A	872	883	Right-handed alpha
Helix 41	AE5	A	893	898	Right-handed alpha
Helix 42	AE6	A	901	906	Right-handed alpha
Helix 43	AE7	A	909	924	Right-handed alpha
Helix 44	AE8	A	944	957	Right-handed alpha
Helix 45	AE9	A	986	993	Right-handed alpha
Helix 46	AF1	A	994	999	Right-handed alpha
Helix 47	AF2	A	1013	1023	Right-handed alpha
Helix 48	AF3	A	1024	1031	Right-handed alpha
Helix 49	AF4	A	1060	1065	Right-handed alpha
Helix 50	AF5	A	1082	1095	Right-handed alpha
Helix 51	AF6	A	1107	1111	Right-handed 310
Helix 52	AF7	A	1119	1131	Right-handed alpha
Helix 53	AF8	A	1144	1149	Right-handed alpha
Helix 54	AF9	A	1175	1188	Right-handed alpha
Helix 55	AG1	A	1202	1213	Right-handed alpha
Helix 56	AG2	A	1229	1235	Right-handed alpha
Helix 57	AG3	A	1255	1266	Right-handed alpha
Helix 58	AG4	A	1285	1298	Right-handed alpha
Helix 59	AG5	A	1311	1316	Right-handed alpha
Helix 60	AG6	A	1331	1334	Right-handed 310
Helix 61	AG7	A	1335	1340	Right-handed 310
Helix 62	AG8	A	1345	1352	Right-handed alpha
Helix 63	AG9	A	1370	1380	Right-handed alpha
Helix 64	AH1	A	1399	1409	Right-handed alpha
Helix 65	AH2	A	1426	1431	Right-handed alpha
Helix 66	AH3	A	1445	1450	Right-handed alpha
Helix 67	AH4	A	1467	1476	Right-handed alpha
Helix 68	AH5	A	1502	1510	Right-handed alpha
Helix 69	AH6	A	1519	1536	Right-handed alpha
Helix 70	AH7	A	1540	1546	Right-handed alpha
Helix 71	AH8	B	20	32	Right-handed alpha
Helix 72	AH9	B	43	47	Right-handed alpha
Helix 73	AI1	B	48	66	Right-handed alpha
Helix 74	AI2	B	84	95	Right-handed alpha
Helix 75	AI3	B	96	99	Right-handed 310
Helix 76	AI4	B	111	123	Right-handed alpha
Helix 77	AI5	B	124	128	Right-handed 310
Helix 78	AI6	B	137	143	Right-handed alpha
Helix 79	AI7	B	175	178	Right-handed 310
Helix 80	AI8	B	181	187	Right-handed alpha
Helix 81	AI9	B	188	196	Right-handed alpha
Helix 82	AJ1	B	201	219	Right-handed alpha
Helix 83	AJ2	B	228	248	Right-handed alpha
Helix 84	AJ3	B	256	262	Right-handed 310
Helix 85	AJ4	B	265	274	Right-handed alpha
Helix 86	AJ5	B	279	298	Right-handed alpha
Helix 87	AJ6	B	302	317	Right-handed alpha
Helix 88	AJ7	B	326	332	Right-handed alpha
Helix 89	AJ8	B	333	338	Right-handed 310
Helix 90	AJ9	B	339	346	Right-handed alpha
Helix 91	AK1	B	378	386	Right-handed alpha
Helix 92	AK2	B	409	423	Right-handed alpha
Helix 93	AK3	B	435	448	Right-handed alpha
Helix 94	AK4	B	483	496	Right-handed alpha
Helix 95	AK5	B	513	517	Right-handed 310
Helix 96	AK6	B	519	529	Right-handed alpha
Helix 97	AK7	B	564	575	Right-handed alpha
Helix 98	AK8	B	576	578	Right-handed 310
Helix 99	AK9	B	593	607	Right-handed alpha
Helix 100	AL1	B	643	650	Right-handed alpha
Helix 101	AL2	B	668	671	Right-handed 310
Helix 102	AL3	B	672	677	Right-handed alpha
Helix 103	AL4	B	716	725	Right-handed alpha
Helix 104	AL5	B	738	742	Right-handed 310
Helix 105	AL6	B	747	760	Right-handed alpha
Helix 106	AL7	B	795	806	Right-handed alpha
Helix 107	AL8	B	807	809	Right-handed 310
Helix 108	AL9	B	817	823	Right-handed 310
Helix 109	AM1	B	827	835	Right-handed alpha
Helix 110	AM2	B	871	883	Right-handed alpha
Helix 111	AM3	B	888	896	Right-handed alpha
Helix 112	AM4	B	901	905	Right-handed 310
Helix 113	AM5	B	909	924	Right-handed alpha
Helix 114	AM6	B	943	956	Right-handed alpha
Helix 115	AM7	B	986	1002	Right-handed alpha
Helix 116	AM8	B	1013	1032	Right-handed alpha
Helix 117	AM9	B	1060	1065	Right-handed alpha
Helix 118	AN1	B	1076	1078	Right-handed 310
Helix 119	AN2	B	1082	1091	Right-handed alpha
Helix 120	AN3	B	1091	1096	Right-handed alpha
Helix 121	AN4	B	1107	1111	Right-handed 310
Helix 122	AN5	B	1119	1132	Right-handed alpha
Helix 123	AN6	B	1144	1152	Right-handed alpha
Helix 124	AN7	B	1176	1188	Right-handed alpha
Helix 125	AN8	B	1202	1215	Right-handed alpha
Helix 126	AN9	B	1229	1235	Right-handed alpha
Helix 127	AO1	B	1255	1266	Right-handed alpha
Helix 128	AO2	B	1285	1297	Right-handed alpha
Helix 129	AO3	B	1312	1317	Right-handed alpha
Helix 130	AO4	B	1331	1335	Right-handed 310
Helix 131	AO5	B	1336	1340	Right-handed 310
Helix 132	AO6	B	1345	1352	Right-handed alpha
Helix 133	AO7	B	1369	1380	Right-handed alpha
Helix 134	AO8	B	1400	1410	Right-handed alpha
Helix 135	AO9	B	1421	1426	Right-handed alpha
Helix 136	AP1	B	1426	1431	Right-handed alpha
Helix 137	AP2	B	1443	1449	Right-handed alpha
Helix 138	AP3	B	1470	1481	Right-handed alpha
Helix 139	AP4	B	1502	1510	Right-handed alpha
Helix 140	AP5	B	1519	1535	Right-handed alpha
Helix 141	AP6	B	1540	1548	Right-handed alpha

There are 32 sheets in PDB entry 7U5S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	8	first strand
Strand 2	A	11	17	anti-parallel
Strand 3	A	169	173	parallel
Strand 4	A	130	135	parallel
Strand 5	A	105	110	parallel
Strand 6	A	37	42	parallel
Strand 7	A	72	76	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	149	151	first strand
Strand 2	A	162	164	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	359	360	first strand
Strand 2	A	375	376	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	363	365	first strand
Strand 2	A	368	369	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	813	815	first strand
Strand 2	A	390	392	anti-parallel
Strand 3	A	840	841	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	456	first strand
Strand 2	A	461	467	anti-parallel
Strand 3	A	424	429	anti-parallel
Strand 4	A	633	634	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	478	479	first strand
Strand 2	A	505	509	parallel
Strand 3	A	545	547	anti-parallel
Strand 4	A	533	534	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	555	560	first strand
Strand 2	A	582	587	parallel
Strand 3	A	620	623	anti-parallel
Strand 4	A	612	613	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	656	659	first strand
Strand 2	A	692	695	anti-parallel
Strand 3	A	686	687	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	733	735	first strand
Strand 2	A	770	772	anti-parallel
Strand 3	A	763	765	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	863	865	first strand
Strand 2	A	961	964	parallel
Strand 3	A	1004	1007	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	885	888	first strand
Strand 2	A	932	935	parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1220	1223	first strand
Strand 2	A	1192	1196	parallel
Strand 3	A	1159	1165	parallel
Strand 4	A	1136	1140	parallel
Strand 5	A	1101	1104	parallel
Strand 6	A	1070	1074	parallel
Strand 7	A	1045	1049	parallel
Strand 8	A	1240	1242	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1301	1307	first strand
Strand 2	A	1272	1278	parallel
Strand 3	A	1324	1329	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1343	1344	first strand
Strand 2	A	1363	1367	parallel
Strand 3	A	1356	1360	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1438	1440	first strand
Strand 2	A	1415	1418	parallel
Strand 3	A	1390	1394	parallel
Strand 4	A	1453	1458	parallel
Strand 5	A	1491	1494	parallel
Strand 6	A	1515	1517	parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	8	first strand
Strand 2	B	11	17	anti-parallel
Strand 3	B	169	173	parallel
Strand 4	B	130	135	parallel
Strand 5	B	105	110	parallel
Strand 6	B	37	42	parallel
Strand 7	B	72	76	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	149	151	first strand
Strand 2	B	162	164	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	359	360	first strand
Strand 2	B	375	376	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	363	365	first strand
Strand 2	B	368	369	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	813	815	first strand
Strand 2	B	390	392	anti-parallel
Strand 3	B	840	841	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	424	429	first strand
Strand 2	B	461	467	anti-parallel
Strand 3	B	452	456	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	478	479	first strand
Strand 2	B	505	509	parallel
Strand 3	B	544	547	anti-parallel
Strand 4	B	533	534	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	555	560	first strand
Strand 2	B	582	587	parallel
Strand 3	B	620	623	anti-parallel
Strand 4	B	612	613	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	656	659	first strand
Strand 2	B	692	695	anti-parallel
Strand 3	B	686	687	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	735	first strand
Strand 2	B	770	772	anti-parallel
Strand 3	B	763	765	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	861	864	first strand
Strand 2	B	959	964	parallel
Strand 3	B	1004	1007	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	885	886	first strand
Strand 2	B	932	933	parallel

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There are 8 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1220	1225	first strand
Strand 2	B	1192	1198	parallel
Strand 3	B	1159	1165	parallel
Strand 4	B	1136	1140	parallel
Strand 5	B	1101	1104	parallel
Strand 6	B	1068	1074	parallel
Strand 7	B	1045	1049	parallel
Strand 8	B	1240	1242	parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1302	1307	first strand
Strand 2	B	1273	1278	parallel
Strand 3	B	1324	1329	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1343	1344	first strand
Strand 2	B	1363	1366	parallel
Strand 3	B	1357	1360	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1438	1440	first strand
Strand 2	B	1415	1418	parallel
Strand 3	B	1390	1394	parallel
Strand 4	B	1453	1458	parallel
Strand 5	B	1491	1494	parallel
Strand 6	B	1515	1517	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7U5S

Analysis of interatomic Contacts of Structural Units in PDB entry:
7U5S