Analysis of interatomic Contacts of Structural Units in PDB entry:
7U5V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7U5V entry

There are 3 chains in PDB entry 7U5V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3822ALA 3945
C
 VAL 3956VAL 3956
C
 ARG 3958CYS 3959
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 7U5V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3823 3830Right-handed alpha
Helix 2
AA2
A
3867 3878Right-handed alpha
Helix 3
AA3
A
3900 3905Right-handed 310
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There are 3 sheets in PDB entry 7U5V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3831 3835first strand
Strand 2
A
3841 3845anti-parallel
Strand 3
A
3939 3942anti-parallel
Strand 4
A
3906 3907parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3854 3857first strand
Strand 2
A
3923 3930anti-parallel
Strand 3
A
3913 3920anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3861 3864first strand
Strand 2
A
3891 3894anti-parallel
Strand 3
A
3884 3886anti-parallel
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