Analysis of interatomic Contacts of Structural Units in PDB entry:
7U65

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7U65 entry

There are 4 chains in PDB entry 7U65 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 3	GLN 505
G	ARG 3	LYS 85
B	GLN 3	GLN 505
C	GLN 3	LEU 229

There are162 helices in PDB entry 7U65. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	9	Right-handed 310
Helix 2	AA2	A	24	41	Right-handed alpha
Helix 3	AA3	A	42	49	Right-handed alpha
Helix 4	AA4	A	65	91	Right-handed alpha
Helix 5	AA5	A	102	116	Right-handed alpha
Helix 6	AA6	A	125	141	Right-handed alpha
Helix 7	AA7	A	142	145	Right-handed 310
Helix 8	AA8	A	167	180	Right-handed alpha
Helix 9	AA9	A	184	195	Right-handed alpha
Helix 10	AB1	A	202	208	Right-handed alpha
Helix 11	AB2	A	236	238	Right-handed 310
Helix 12	AB3	A	239	250	Right-handed alpha
Helix 13	AB4	A	260	283	Right-handed alpha
Helix 14	AB5	A	287	299	Right-handed alpha
Helix 15	AB6	A	309	319	Right-handed alpha
Helix 16	AB7	A	331	355	Right-handed alpha
Helix 17	AB8	A	355	362	Right-handed alpha
Helix 18	AB9	A	373	390	Right-handed alpha
Helix 19	AC1	A	393	415	Right-handed alpha
Helix 20	AC2	A	416	419	Right-handed 310
Helix 21	AC3	A	421	431	Right-handed alpha
Helix 22	AC4	A	437	446	Right-handed alpha
Helix 23	AC5	A	448	461	Right-handed alpha
Helix 24	AC6	A	468	487	Right-handed alpha
Helix 25	AC7	A	489	501	Right-handed alpha
Helix 26	AC8	G	5	22	Right-handed alpha
Helix 27	AC9	G	62	82	Right-handed alpha
Helix 28	AD1	B	5	9	Right-handed 310
Helix 29	AD2	B	24	41	Right-handed alpha
Helix 30	AD3	B	42	49	Right-handed alpha
Helix 31	AD4	B	65	91	Right-handed alpha
Helix 32	AD5	B	102	116	Right-handed alpha
Helix 33	AD6	B	125	141	Right-handed alpha
Helix 34	AD7	B	142	145	Right-handed 310
Helix 35	AD8	B	167	180	Right-handed alpha
Helix 36	AD9	B	184	195	Right-handed alpha
Helix 37	AE1	B	202	208	Right-handed alpha
Helix 38	AE2	B	236	238	Right-handed 310
Helix 39	AE3	B	239	250	Right-handed alpha
Helix 40	AE4	B	260	283	Right-handed alpha
Helix 41	AE5	B	287	299	Right-handed alpha
Helix 42	AE6	B	309	319	Right-handed alpha
Helix 43	AE7	B	331	355	Right-handed alpha
Helix 44	AE8	B	355	362	Right-handed alpha
Helix 45	AE9	B	373	390	Right-handed alpha
Helix 46	AF1	B	393	415	Right-handed alpha
Helix 47	AF2	B	416	419	Right-handed 310
Helix 48	AF3	B	421	431	Right-handed alpha
Helix 49	AF4	B	437	446	Right-handed alpha
Helix 50	AF5	B	448	461	Right-handed alpha
Helix 51	AF6	B	468	487	Right-handed alpha
Helix 52	AF7	B	489	501	Right-handed alpha
Helix 53	AF8	C	5	9	Right-handed 310
Helix 54	AF9	C	24	41	Right-handed alpha
Helix 55	AG1	C	42	49	Right-handed alpha
Helix 56	AG2	C	65	91	Right-handed alpha
Helix 57	AG3	C	102	116	Right-handed alpha
Helix 58	AG4	C	125	141	Right-handed alpha
Helix 59	AG5	C	142	145	Right-handed 310
Helix 60	AG6	C	167	180	Right-handed alpha
Helix 61	AG7	C	184	195	Right-handed alpha
Helix 62	AG8	C	202	208	Right-handed alpha
Helix 63	AG9	C	236	238	Right-handed 310
Helix 64	AH1	C	239	250	Right-handed alpha
Helix 65	AH2	C	260	283	Right-handed alpha
Helix 66	AH3	C	287	299	Right-handed alpha
Helix 67	AH4	C	309	319	Right-handed alpha
Helix 68	AH5	C	331	355	Right-handed alpha
Helix 69	AH6	C	355	362	Right-handed alpha
Helix 70	AH7	C	373	390	Right-handed alpha
Helix 71	AH8	C	393	415	Right-handed alpha
Helix 72	AH9	C	416	419	Right-handed 310
Helix 73	AI1	C	421	431	Right-handed alpha
Helix 74	AI2	C	437	446	Right-handed alpha
Helix 75	AI3	C	448	461	Right-handed alpha
Helix 76	AI4	C	468	487	Right-handed alpha
Helix 77	AI5	C	489	501	Right-handed alpha
Helix 78	AI6	D	5	9	Right-handed 310
Helix 79	AI7	D	24	41	Right-handed alpha
Helix 80	AI8	D	42	49	Right-handed alpha
Helix 81	AI9	D	65	91	Right-handed alpha
Helix 82	AJ1	D	102	116	Right-handed alpha
Helix 83	AJ2	D	125	141	Right-handed alpha
Helix 84	AJ3	D	142	145	Right-handed 310
Helix 85	AJ4	D	167	180	Right-handed alpha
Helix 86	AJ5	D	184	195	Right-handed alpha
Helix 87	AJ6	D	202	208	Right-handed alpha
Helix 88	AJ7	D	236	238	Right-handed 310
Helix 89	AJ8	D	239	250	Right-handed alpha
Helix 90	AJ9	D	260	283	Right-handed alpha
Helix 91	AK1	D	287	299	Right-handed alpha
Helix 92	AK2	D	309	319	Right-handed alpha
Helix 93	AK3	D	331	355	Right-handed alpha
Helix 94	AK4	D	355	362	Right-handed alpha
Helix 95	AK5	D	373	390	Right-handed alpha
Helix 96	AK6	D	393	415	Right-handed alpha
Helix 97	AK7	D	416	419	Right-handed 310
Helix 98	AK8	D	421	431	Right-handed alpha
Helix 99	AK9	D	437	446	Right-handed alpha
Helix 100	AL1	D	448	461	Right-handed alpha
Helix 101	AL2	D	468	487	Right-handed alpha
Helix 102	AL3	D	489	501	Right-handed alpha
Helix 103	AL4	E	5	9	Right-handed 310
Helix 104	AL5	E	24	41	Right-handed alpha
Helix 105	AL6	E	42	49	Right-handed alpha
Helix 106	AL7	E	65	91	Right-handed alpha
Helix 107	AL8	E	102	116	Right-handed alpha
Helix 108	AL9	E	125	141	Right-handed alpha
Helix 109	AM1	E	142	145	Right-handed 310
Helix 110	AM2	E	167	180	Right-handed alpha
Helix 111	AM3	E	184	195	Right-handed alpha
Helix 112	AM4	E	202	208	Right-handed alpha
Helix 113	AM5	E	236	238	Right-handed 310
Helix 114	AM6	E	239	250	Right-handed alpha
Helix 115	AM7	E	260	283	Right-handed alpha
Helix 116	AM8	E	287	299	Right-handed alpha
Helix 117	AM9	E	309	319	Right-handed alpha
Helix 118	AN1	E	331	355	Right-handed alpha
Helix 119	AN2	E	355	362	Right-handed alpha
Helix 120	AN3	E	373	390	Right-handed alpha
Helix 121	AN4	E	393	415	Right-handed alpha
Helix 122	AN5	E	416	419	Right-handed 310
Helix 123	AN6	E	421	431	Right-handed alpha
Helix 124	AN7	E	437	446	Right-handed alpha
Helix 125	AN8	E	448	461	Right-handed alpha
Helix 126	AN9	E	468	487	Right-handed alpha
Helix 127	AO1	E	489	501	Right-handed alpha
Helix 128	AO2	F	5	9	Right-handed 310
Helix 129	AO3	F	24	41	Right-handed alpha
Helix 130	AO4	F	42	49	Right-handed alpha
Helix 131	AO5	F	65	91	Right-handed alpha
Helix 132	AO6	F	102	116	Right-handed alpha
Helix 133	AO7	F	125	141	Right-handed alpha
Helix 134	AO8	F	142	145	Right-handed 310
Helix 135	AO9	F	167	180	Right-handed alpha
Helix 136	AP1	F	184	195	Right-handed alpha
Helix 137	AP2	F	202	208	Right-handed alpha
Helix 138	AP3	F	236	238	Right-handed 310
Helix 139	AP4	F	239	250	Right-handed alpha
Helix 140	AP5	F	260	283	Right-handed alpha
Helix 141	AP6	F	287	299	Right-handed alpha
Helix 142	AP7	F	309	319	Right-handed alpha
Helix 143	AP8	F	331	355	Right-handed alpha
Helix 144	AP9	F	355	362	Right-handed alpha
Helix 145	AQ1	F	373	390	Right-handed alpha
Helix 146	AQ2	F	393	415	Right-handed alpha
Helix 147	AQ3	F	416	419	Right-handed 310
Helix 148	AQ4	F	421	431	Right-handed alpha
Helix 149	AQ5	F	437	446	Right-handed alpha
Helix 150	AQ6	F	448	461	Right-handed alpha
Helix 151	AQ7	F	468	487	Right-handed alpha
Helix 152	AQ8	F	489	501	Right-handed alpha
Helix 153	AQ9	H	5	22	Right-handed alpha
Helix 154	AR1	H	62	82	Right-handed alpha
Helix 155	AR2	I	5	22	Right-handed alpha
Helix 156	AR3	I	62	82	Right-handed alpha
Helix 157	AR4	J	5	22	Right-handed alpha
Helix 158	AR5	J	62	82	Right-handed alpha
Helix 159	AR6	K	5	22	Right-handed alpha
Helix 160	AR7	K	62	82	Right-handed alpha
Helix 161	AR8	L	5	22	Right-handed alpha
Helix 162	AR9	L	62	82	Right-handed alpha

There are 12 sheets in PDB entry 7U65. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	214	215	first strand
Strand 2	A	233	235	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	25	33	first strand
Strand 2	G	38	46	anti-parallel
Strand 3	G	55	60	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	214	215	first strand
Strand 2	B	233	235	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	214	215	first strand
Strand 2	C	233	235	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	214	215	first strand
Strand 2	D	233	235	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	214	215	first strand
Strand 2	E	233	235	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	214	215	first strand
Strand 2	F	233	235	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	25	33	first strand
Strand 2	H	38	46	anti-parallel
Strand 3	H	55	60	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	25	33	first strand
Strand 2	I	38	46	anti-parallel
Strand 3	I	55	60	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	25	33	first strand
Strand 2	J	38	46	anti-parallel
Strand 3	J	55	60	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	25	33	first strand
Strand 2	K	38	46	anti-parallel
Strand 3	K	55	60	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	25	33	first strand
Strand 2	L	38	46	anti-parallel
Strand 3	L	55	60	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7U65

Analysis of interatomic Contacts of Structural Units in PDB entry:
7U65