Analysis of interatomic Contacts of Structural Units in PDB entry:
7U6E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7U6E entry

There are 6 chains in PDB entry 7U6E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1ASN 21
B
 ASN 3THR 27
E
 HIS 1ASN 594
F
 LYS 310PRO 718
G
 SER 1PRO 18
H
 SER 1PRO 18
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 22 helices in PDB entry 7U6E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 7Right-handed alpha
Helix 2
AA2
A
12 18Right-handed alpha
Helix 3
AA3
B
7 19Right-handed alpha
Helix 4
AA4
E
16 24Right-handed 310
Helix 5
AA5
E
42 47Right-handed alpha
Helix 6
AA6
E
71 76Right-handed alpha
Helix 7
AA7
E
132 137Right-handed alpha
Helix 8
AA8
E
148 152Right-handed 310
Helix 9
AA9
E
255 269Right-handed alpha
Helix 10
AB1
E
323 329Right-handed alpha
Helix 11
AB2
E
350 359Right-handed alpha
Helix 12
AB3
E
435 446Right-handed alpha
Helix 13
AB4
E
496 498Right-handed 310
Helix 14
AB5
F
323 328Right-handed alpha
Helix 15
AB6
F
329 331Right-handed 310
Helix 16
AB7
F
352 360Right-handed alpha
Helix 17
AB8
F
435 446Right-handed alpha
Helix 18
AB9
F
496 498Right-handed 310
Helix 19
AC1
F
542 546Right-handed 310
Helix 20
AC2
F
691 714Right-handed alpha
Helix 21
AC3
G
1 13Right-handed alpha
Helix 22
AC4
H
1 13Right-handed alpha
Back to top of page

There are 16 sheets in PDB entry 7U6E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
7 14first strand
Strand 2
E
28 38parallel
Strand 3
E
56 57parallel
Strand 4
E
81 82parallel
Strand 5
E
111 112parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
7 14first strand
Strand 2
E
28 38parallel
Strand 3
E
61 66parallel
Strand 4
E
91 96parallel
Strand 5
E
116 120parallel
Strand 6
E
144 146parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
171 172first strand
Strand 2
E
179 180anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
231 233first strand
Strand 2
E
236 238anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
252 254first strand
Strand 2
E
246 248anti-parallel
Strand 3
E
283 285parallel
Strand 4
E
278 280anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
292 294first strand
Strand 2
E
301 303anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
311 321first strand
Strand 2
E
335 342parallel
Strand 3
E
363 364parallel
Strand 4
E
387 388parallel
Strand 5
E
420 421parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
311 321first strand
Strand 2
E
335 342parallel
Strand 3
E
368 371parallel
Strand 4
E
398 403parallel
Strand 5
E
425 429parallel
Strand 6
E
456 457parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
471 472first strand
Strand 2
E
581 582parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
477 480first strand
Strand 2
E
485 488anti-parallel
Strand 3
E
550 553anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
530 534first strand
Strand 2
E
500 509anti-parallel
Strand 3
E
561 570anti-parallel
Strand 4
E
586 589anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
311 321first strand
Strand 2
F
335 342parallel
Strand 3
F
363 366parallel
Strand 4
F
387 392parallel
Strand 5
F
420 421parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
311 321first strand
Strand 2
F
335 342parallel
Strand 3
F
368 371parallel
Strand 4
F
398 403parallel
Strand 5
F
425 429parallel
Strand 6
F
456 457parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
471 473first strand
Strand 2
F
581 583parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
475 480first strand
Strand 2
F
485 489anti-parallel
Strand 3
F
550 553anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
532 534first strand
Strand 2
F
500 509anti-parallel
Strand 3
F
562 570anti-parallel
Strand 4
F
586 588anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il