Analysis of interatomic Contacts of Structural Units in PDB entry:
7U6H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7U6H entry

There are 4 chains in PDB entry 7U6H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 7	ARG 259
B	LEU 8	THR 260
C	SER 7	ARG 259
D	SER 7	ARG 259

There are 44 helices in PDB entry 7U6H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	7	26	Right-handed alpha
Helix 2	AA2	A	27	42	Right-handed alpha
Helix 3	AA3	A	53	72	Right-handed alpha
Helix 4	AA4	A	80	83	Right-handed 310
Helix 5	AA5	A	93	101	Right-handed alpha
Helix 6	AA6	A	102	109	Right-handed alpha
Helix 7	AA7	A	110	122	Right-handed alpha
Helix 8	AA8	A	129	132	Right-handed 310
Helix 9	AA9	A	166	170	Right-handed 310
Helix 10	AB1	A	187	195	Right-handed alpha
Helix 11	AB2	A	247	254	Right-handed alpha
Helix 12	AB3	B	9	26	Right-handed alpha
Helix 13	AB4	B	27	42	Right-handed alpha
Helix 14	AB5	B	53	72	Right-handed alpha
Helix 15	AB6	B	80	83	Right-handed 310
Helix 16	AB7	B	93	101	Right-handed alpha
Helix 17	AB8	B	102	109	Right-handed alpha
Helix 18	AB9	B	110	122	Right-handed alpha
Helix 19	AC1	B	129	132	Right-handed 310
Helix 20	AC2	B	166	170	Right-handed 310
Helix 21	AC3	B	187	194	Right-handed alpha
Helix 22	AC4	B	247	254	Right-handed alpha
Helix 23	AC5	C	8	26	Right-handed alpha
Helix 24	AC6	C	27	42	Right-handed alpha
Helix 25	AC7	C	53	72	Right-handed alpha
Helix 26	AC8	C	80	83	Right-handed 310
Helix 27	AC9	C	93	101	Right-handed alpha
Helix 28	AD1	C	102	109	Right-handed alpha
Helix 29	AD2	C	110	122	Right-handed alpha
Helix 30	AD3	C	129	132	Right-handed 310
Helix 31	AD4	C	166	170	Right-handed 310
Helix 32	AD5	C	187	195	Right-handed alpha
Helix 33	AD6	C	247	254	Right-handed alpha
Helix 34	AD7	D	8	26	Right-handed alpha
Helix 35	AD8	D	27	42	Right-handed alpha
Helix 36	AD9	D	53	72	Right-handed alpha
Helix 37	AE1	D	80	83	Right-handed 310
Helix 38	AE2	D	93	101	Right-handed alpha
Helix 39	AE3	D	102	109	Right-handed alpha
Helix 40	AE4	D	110	122	Right-handed alpha
Helix 41	AE5	D	129	132	Right-handed 310
Helix 42	AE6	D	166	170	Right-handed 310
Helix 43	AE7	D	187	195	Right-handed alpha
Helix 44	AE8	D	247	254	Right-handed alpha

There are 8 sheets in PDB entry 7U6H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	46	first strand
Strand 2	A	207	211	anti-parallel
Strand 3	A	155	162	anti-parallel
Strand 4	A	228	237	anti-parallel
Strand 5	A	134	139	anti-parallel
Strand 6	A	86	92	anti-parallel
Strand 7	A	125	127	first strand

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	78	first strand
Strand 2	A	86	92	anti-parallel
Strand 3	A	134	139	anti-parallel
Strand 4	A	228	237	anti-parallel
Strand 5	A	145	149	first strand
Strand 6	A	216	219	anti-parallel
Strand 7	A	173	176	anti-parallel
Strand 8	A	198	200	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	46	first strand
Strand 2	B	207	211	anti-parallel
Strand 3	B	155	162	anti-parallel
Strand 4	B	228	237	anti-parallel
Strand 5	B	134	139	anti-parallel
Strand 6	B	86	92	anti-parallel
Strand 7	B	125	127	first strand

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	78	first strand
Strand 2	B	86	92	anti-parallel
Strand 3	B	134	139	anti-parallel
Strand 4	B	228	237	anti-parallel
Strand 5	B	145	149	first strand
Strand 6	B	216	219	anti-parallel
Strand 7	B	173	176	anti-parallel
Strand 8	B	198	200	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	46	first strand
Strand 2	C	207	211	anti-parallel
Strand 3	C	155	162	anti-parallel
Strand 4	C	228	237	anti-parallel
Strand 5	C	134	139	anti-parallel
Strand 6	C	86	92	anti-parallel
Strand 7	C	125	127	first strand

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	78	first strand
Strand 2	C	86	92	anti-parallel
Strand 3	C	134	139	anti-parallel
Strand 4	C	228	237	anti-parallel
Strand 5	C	145	149	first strand
Strand 6	C	216	219	anti-parallel
Strand 7	C	173	176	anti-parallel
Strand 8	C	198	200	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	43	46	first strand
Strand 2	D	207	211	anti-parallel
Strand 3	D	155	162	anti-parallel
Strand 4	D	228	237	anti-parallel
Strand 5	D	134	139	anti-parallel
Strand 6	D	86	92	anti-parallel
Strand 7	D	125	127	first strand

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	73	78	first strand
Strand 2	D	86	92	anti-parallel
Strand 3	D	134	139	anti-parallel
Strand 4	D	228	237	anti-parallel
Strand 5	D	145	149	first strand
Strand 6	D	216	219	anti-parallel
Strand 7	D	173	176	anti-parallel
Strand 8	D	198	200	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7U6H

Analysis of interatomic Contacts of Structural Units in PDB entry:
7U6H