Analysis of interatomic Contacts of Structural Units in PDB entry:
7U6L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7U6L entry

There are 3 chains in PDB entry 7U6L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 13	GLU 448
B	VAL 13	GLU 448
C	VAL 13	ALA 442

There are 68 helices in PDB entry 7U6L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	23	36	Right-handed alpha
Helix 2	AA2	A	74	84	Right-handed alpha
Helix 3	AA3	A	113	128	Right-handed alpha
Helix 4	AA4	A	130	135	Right-handed alpha
Helix 5	AA5	A	144	152	Right-handed alpha
Helix 6	AA6	A	155	162	Right-handed alpha
Helix 7	AA7	A	166	182	Right-handed alpha
Helix 8	AA8	A	189	200	Right-handed alpha
Helix 9	AA9	A	203	212	Right-handed alpha
Helix 10	AB1	A	219	231	Right-handed alpha
Helix 11	AB2	A	270	277	Right-handed 310
Helix 12	AB3	A	284	294	Right-handed alpha
Helix 13	AB4	A	347	351	Right-handed 310
Helix 14	AB5	A	355	364	Right-handed alpha
Helix 15	AB6	A	396	407	Right-handed alpha
Helix 16	AB7	A	416	420	Right-handed 310
Helix 17	AB8	A	426	448	Right-handed alpha
Helix 18	AB9	B	23	36	Right-handed alpha
Helix 19	AC1	B	74	84	Right-handed alpha
Helix 20	AC2	B	113	128	Right-handed alpha
Helix 21	AC3	B	130	135	Right-handed alpha
Helix 22	AC4	B	144	152	Right-handed alpha
Helix 23	AC5	B	155	162	Right-handed alpha
Helix 24	AC6	B	166	182	Right-handed alpha
Helix 25	AC7	B	184	188	Right-handed 310
Helix 26	AC8	B	189	200	Right-handed alpha
Helix 27	AC9	B	203	212	Right-handed alpha
Helix 28	AD1	B	219	231	Right-handed alpha
Helix 29	AD2	B	270	277	Right-handed 310
Helix 30	AD3	B	284	294	Right-handed alpha
Helix 31	AD4	B	347	351	Right-handed 310
Helix 32	AD5	B	355	364	Right-handed alpha
Helix 33	AD6	B	396	407	Right-handed alpha
Helix 34	AD7	B	416	420	Right-handed 310
Helix 35	AD8	B	426	448	Right-handed alpha
Helix 36	AD9	C	23	36	Right-handed alpha
Helix 37	AE1	C	74	84	Right-handed alpha
Helix 38	AE2	C	113	128	Right-handed alpha
Helix 39	AE3	C	130	135	Right-handed alpha
Helix 40	AE4	C	144	152	Right-handed alpha
Helix 41	AE5	C	155	162	Right-handed alpha
Helix 42	AE6	C	166	182	Right-handed alpha
Helix 43	AE7	C	189	200	Right-handed alpha
Helix 44	AE8	C	203	212	Right-handed alpha
Helix 45	AE9	C	219	230	Right-handed alpha
Helix 46	AF1	C	270	277	Right-handed 310
Helix 47	AF2	C	284	294	Right-handed alpha
Helix 48	AF3	C	355	364	Right-handed alpha
Helix 49	AF4	C	396	407	Right-handed alpha
Helix 50	AF5	C	416	420	Right-handed 310
Helix 51	AF6	C	426	449	Right-handed alpha
Helix 52	AF7	D	23	35	Right-handed alpha
Helix 53	AF8	D	74	84	Right-handed alpha
Helix 54	AF9	D	113	128	Right-handed alpha
Helix 55	AG1	D	130	135	Right-handed alpha
Helix 56	AG2	D	144	152	Right-handed alpha
Helix 57	AG3	D	155	162	Right-handed alpha
Helix 58	AG4	D	166	182	Right-handed alpha
Helix 59	AG5	D	189	200	Right-handed alpha
Helix 60	AG6	D	203	212	Right-handed alpha
Helix 61	AG7	D	219	231	Right-handed alpha
Helix 62	AG8	D	270	277	Right-handed 310
Helix 63	AG9	D	284	294	Right-handed alpha
Helix 64	AH1	D	347	351	Right-handed 310
Helix 65	AH2	D	355	364	Right-handed alpha
Helix 66	AH3	D	396	407	Right-handed alpha
Helix 67	AH4	D	416	420	Right-handed 310
Helix 68	AH5	D	426	449	Right-handed alpha

There are 24 sheets in PDB entry 7U6L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	234	236	first strand
Strand 2	A	40	43	parallel
Strand 3	A	15	20	parallel
Strand 4	A	258	267	parallel
Strand 5	A	251	255	anti-parallel
Strand 6	A	241	246	anti-parallel
Strand 7	A	278	280	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	234	236	first strand
Strand 2	A	40	43	parallel
Strand 3	A	15	20	parallel
Strand 4	A	258	267	parallel
Strand 5	A	412	414	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	56	first strand
Strand 2	A	63	64	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	69	70	first strand
Strand 2	A	214	216	anti-parallel
Strand 3	A	88	90	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	112	first strand
Strand 2	A	99	104	anti-parallel
Strand 3	A	313	316	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	335	first strand
Strand 2	A	338	345	anti-parallel
Strand 3	A	300	306	anti-parallel
Strand 4	A	372	376	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	234	236	first strand
Strand 2	B	40	43	parallel
Strand 3	B	15	20	parallel
Strand 4	B	258	267	parallel
Strand 5	B	251	255	anti-parallel
Strand 6	B	241	246	anti-parallel
Strand 7	B	278	280	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	234	236	first strand
Strand 2	B	40	43	parallel
Strand 3	B	15	20	parallel
Strand 4	B	258	267	parallel
Strand 5	B	412	414	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	56	first strand
Strand 2	B	63	64	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	70	first strand
Strand 2	B	214	216	anti-parallel
Strand 3	B	88	90	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	112	first strand
Strand 2	B	99	104	anti-parallel
Strand 3	B	313	316	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	326	335	first strand
Strand 2	B	338	345	anti-parallel
Strand 3	B	300	306	anti-parallel
Strand 4	B	372	376	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	234	236	first strand
Strand 2	C	40	43	parallel
Strand 3	C	15	20	parallel
Strand 4	C	258	267	parallel
Strand 5	C	251	255	anti-parallel
Strand 6	C	241	246	anti-parallel
Strand 7	C	278	280	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	234	236	first strand
Strand 2	C	40	43	parallel
Strand 3	C	15	20	parallel
Strand 4	C	258	267	parallel
Strand 5	C	412	414	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	55	56	first strand
Strand 2	C	63	64	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	69	70	first strand
Strand 2	C	214	216	anti-parallel
Strand 3	C	88	90	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	107	112	first strand
Strand 2	C	99	104	anti-parallel
Strand 3	C	313	316	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	326	335	first strand
Strand 2	C	338	345	anti-parallel
Strand 3	C	300	306	anti-parallel
Strand 4	C	372	376	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	233	236	first strand
Strand 2	D	40	43	parallel
Strand 3	D	15	20	parallel
Strand 4	D	258	267	parallel
Strand 5	D	251	255	anti-parallel
Strand 6	D	241	246	anti-parallel
Strand 7	D	278	280	parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	233	236	first strand
Strand 2	D	40	43	parallel
Strand 3	D	15	20	parallel
Strand 4	D	258	267	parallel
Strand 5	D	412	414	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	55	56	first strand
Strand 2	D	63	64	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	69	70	first strand
Strand 2	D	214	216	anti-parallel
Strand 3	D	88	90	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	107	112	first strand
Strand 2	D	99	104	anti-parallel
Strand 3	D	313	316	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	326	335	first strand
Strand 2	D	338	345	anti-parallel
Strand 3	D	300	306	anti-parallel
Strand 4	D	372	376	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7U6L

Analysis of interatomic Contacts of Structural Units in PDB entry:
7U6L