Analysis of interatomic Contacts of Structural Units in PDB entry:
7U9G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7U9G entry

There are 9 chains in PDB entry 7U9G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 1	PRO 402
B	LYS 1	PRO 402
C	LYS 1	PRO 402
D	SER 2	LEU 110
E	SER 2	LEU 110
F	SER 2	LEU 110
G	GLN 218	SER 339
H	GLN 218	SER 339
I	GLN 218	SER 339

There are 45 helices in PDB entry 7U9G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	18	22	Right-handed 310
Helix 2	AA2	A	90	104	Right-handed alpha
Helix 3	AA3	A	105	114	Right-handed alpha
Helix 4	AA4	A	154	158	Right-handed 310
Helix 5	AA5	A	263	269	Right-handed alpha
Helix 6	AA6	A	276	294	Right-handed alpha
Helix 7	AA7	A	298	302	Right-handed alpha
Helix 8	AA8	A	303	305	Right-handed 310
Helix 9	AA9	A	334	339	Right-handed alpha
Helix 10	AB1	A	373	380	Right-handed alpha
Helix 11	AB2	A	384	389	Right-handed alpha
Helix 12	AB3	B	18	22	Right-handed 310
Helix 13	AB4	B	90	104	Right-handed alpha
Helix 14	AB5	B	105	114	Right-handed alpha
Helix 15	AB6	B	154	158	Right-handed 310
Helix 16	AB7	B	263	269	Right-handed alpha
Helix 17	AB8	B	276	294	Right-handed alpha
Helix 18	AB9	B	298	302	Right-handed alpha
Helix 19	AC1	B	303	305	Right-handed 310
Helix 20	AC2	B	334	339	Right-handed alpha
Helix 21	AC3	B	373	380	Right-handed alpha
Helix 22	AC4	B	384	389	Right-handed alpha
Helix 23	AC5	C	18	22	Right-handed 310
Helix 24	AC6	C	90	104	Right-handed alpha
Helix 25	AC7	C	105	114	Right-handed alpha
Helix 26	AC8	C	154	158	Right-handed 310
Helix 27	AC9	C	263	269	Right-handed alpha
Helix 28	AD1	C	276	294	Right-handed alpha
Helix 29	AD2	C	298	302	Right-handed alpha
Helix 30	AD3	C	303	305	Right-handed 310
Helix 31	AD4	C	334	339	Right-handed alpha
Helix 32	AD5	C	373	380	Right-handed alpha
Helix 33	AD6	C	384	389	Right-handed alpha
Helix 34	AD7	D	80	84	Right-handed 310
Helix 35	AD8	E	80	84	Right-handed 310
Helix 36	AD9	F	80	84	Right-handed 310
Helix 37	AE1	G	278	281	Right-handed 310
Helix 38	AE2	G	290	292	Right-handed 310
Helix 39	AE3	G	303	307	Right-handed 310
Helix 40	AE4	H	278	281	Right-handed 310
Helix 41	AE5	H	290	292	Right-handed 310
Helix 42	AE6	H	303	307	Right-handed 310
Helix 43	AE7	I	278	281	Right-handed 310
Helix 44	AE8	I	290	292	Right-handed 310
Helix 45	AE9	I	303	307	Right-handed 310

There are 42 sheets in PDB entry 7U9G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	11	first strand
Strand 2	A	321	332	anti-parallel
Strand 3	A	15	16	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	11	first strand
Strand 2	A	321	332	anti-parallel
Strand 3	A	311	318	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	216	218	first strand
Strand 2	A	205	210	anti-parallel
Strand 3	A	192	202	anti-parallel
Strand 4	A	37	46	anti-parallel
Strand 5	A	240	242	anti-parallel
Strand 6	A	230	234	anti-parallel
Strand 7	A	223	227	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	87	first strand
Strand 2	A	55	69	anti-parallel
Strand 3	A	138	143	anti-parallel
Strand 4	A	148	150	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	134	first strand
Strand 2	A	55	69	anti-parallel
Strand 3	A	176	180	anti-parallel
Strand 4	A	169	170	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	295	297	first strand
Strand 2	A	390	392	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	346	347	first strand
Strand 2	A	350	351	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	364	365	first strand
Strand 2	A	371	372	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	11	first strand
Strand 2	B	321	332	anti-parallel
Strand 3	B	15	16	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	11	first strand
Strand 2	B	321	332	anti-parallel
Strand 3	B	311	318	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	216	218	first strand
Strand 2	B	205	210	anti-parallel
Strand 3	B	192	202	anti-parallel
Strand 4	B	37	46	anti-parallel
Strand 5	B	240	242	anti-parallel
Strand 6	B	230	234	anti-parallel
Strand 7	B	223	227	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	82	87	first strand
Strand 2	B	55	69	anti-parallel
Strand 3	B	138	143	anti-parallel
Strand 4	B	148	150	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	134	first strand
Strand 2	B	55	69	anti-parallel
Strand 3	B	176	180	anti-parallel
Strand 4	B	169	170	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	295	297	first strand
Strand 2	B	390	392	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	347	first strand
Strand 2	B	350	351	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	364	365	first strand
Strand 2	B	371	372	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	11	first strand
Strand 2	C	321	332	anti-parallel
Strand 3	C	15	16	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	11	first strand
Strand 2	C	321	332	anti-parallel
Strand 3	C	311	318	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	216	218	first strand
Strand 2	C	205	210	anti-parallel
Strand 3	C	192	202	anti-parallel
Strand 4	C	37	46	anti-parallel
Strand 5	C	240	242	anti-parallel
Strand 6	C	230	234	anti-parallel
Strand 7	C	223	227	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	82	87	first strand
Strand 2	C	55	69	anti-parallel
Strand 3	C	138	143	anti-parallel
Strand 4	C	148	150	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	134	first strand
Strand 2	C	55	69	anti-parallel
Strand 3	C	176	180	anti-parallel
Strand 4	C	169	170	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	295	297	first strand
Strand 2	C	390	392	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	346	347	first strand
Strand 2	C	350	351	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	364	365	first strand
Strand 2	C	371	372	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	6	first strand
Strand 2	D	18	23	anti-parallel
Strand 3	D	71	76	anti-parallel
Strand 4	D	63	67	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	12	first strand
Strand 2	D	105	109	parallel
Strand 3	D	86	93	anti-parallel
Strand 4	D	34	39	anti-parallel
Strand 5	D	46	47	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	12	first strand
Strand 2	D	105	109	parallel
Strand 3	D	86	93	anti-parallel
Strand 4	D	98	101	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	6	first strand
Strand 2	E	18	23	anti-parallel
Strand 3	E	71	76	anti-parallel
Strand 4	E	63	67	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	12	first strand
Strand 2	E	105	109	parallel
Strand 3	E	86	93	anti-parallel
Strand 4	E	34	39	anti-parallel
Strand 5	E	46	47	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	12	first strand
Strand 2	E	105	109	parallel
Strand 3	E	86	93	anti-parallel
Strand 4	E	98	101	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	6	first strand
Strand 2	F	18	23	anti-parallel
Strand 3	F	71	76	anti-parallel
Strand 4	F	63	67	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	9	12	first strand
Strand 2	F	105	109	parallel
Strand 3	F	86	93	anti-parallel
Strand 4	F	34	39	anti-parallel
Strand 5	F	46	47	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	9	12	first strand
Strand 2	F	105	109	parallel
Strand 3	F	86	93	anti-parallel
Strand 4	F	98	101	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	220	224	first strand
Strand 2	G	238	242	anti-parallel
Strand 3	G	294	299	anti-parallel
Strand 4	G	284	289	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	228	229	first strand
Strand 2	G	334	338	parallel
Strand 3	G	308	316	anti-parallel
Strand 4	G	250	256	anti-parallel
Strand 5	G	263	269	anti-parallel
Strand 6	G	274	276	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	228	229	first strand
Strand 2	G	334	338	parallel
Strand 3	G	308	316	anti-parallel
Strand 4	G	326	330	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	220	224	first strand
Strand 2	H	238	242	anti-parallel
Strand 3	H	294	299	anti-parallel
Strand 4	H	284	289	anti-parallel

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There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	228	229	first strand
Strand 2	H	334	338	parallel
Strand 3	H	308	316	anti-parallel
Strand 4	H	250	256	anti-parallel
Strand 5	H	263	269	anti-parallel
Strand 6	H	274	276	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	228	229	first strand
Strand 2	H	334	338	parallel
Strand 3	H	308	316	anti-parallel
Strand 4	H	326	330	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	220	224	first strand
Strand 2	I	238	242	anti-parallel
Strand 3	I	294	299	anti-parallel
Strand 4	I	284	289	anti-parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	228	229	first strand
Strand 2	I	334	338	parallel
Strand 3	I	308	316	anti-parallel
Strand 4	I	250	256	anti-parallel
Strand 5	I	263	269	anti-parallel
Strand 6	I	274	276	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	228	229	first strand
Strand 2	I	334	338	parallel
Strand 3	I	308	316	anti-parallel
Strand 4	I	326	330	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7U9G

Analysis of interatomic Contacts of Structural Units in PDB entry:
7U9G