Analysis of interatomic Contacts of Structural Units in PDB entry:
7U9K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7U9K entry

There are 2 chains in PDB entry 7U9K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3LYS 354
B
 GLU 4GLN 349
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7U9K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 31Right-handed alpha
Helix 2
AA2
A
61 66Right-handed 310
Helix 3
AA3
A
74 81Right-handed alpha
Helix 4
AA4
A
103 113Right-handed alpha
Helix 5
AA5
A
120 129Right-handed alpha
Helix 6
AA6
A
129 141Right-handed alpha
Helix 7
AA7
A
152 170Right-handed alpha
Helix 8
AA8
A
192 205Right-handed alpha
Helix 9
AA9
A
266 284Right-handed alpha
Helix 10
AB1
A
317 326Right-handed alpha
Helix 11
AB2
A
329 350Right-handed alpha
Helix 12
AB3
B
16 31Right-handed alpha
Helix 13
AB4
B
62 66Right-handed 310
Helix 14
AB5
B
75 79Right-handed alpha
Helix 15
AB6
B
103 112Right-handed alpha
Helix 16
AB7
B
120 129Right-handed alpha
Helix 17
AB8
B
129 141Right-handed alpha
Helix 18
AB9
B
152 158Right-handed alpha
Helix 19
AC1
B
158 170Right-handed alpha
Helix 20
AC2
B
192 204Right-handed alpha
Helix 21
AC3
B
247 253Right-handed alpha
Helix 22
AC4
B
266 284Right-handed alpha
Helix 23
AC5
B
318 325Right-handed alpha
Helix 24
AC6
B
329 349Right-handed alpha
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There are 8 sheets in PDB entry 7U9K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 52first strand
Strand 2
A
36 43anti-parallel
Strand 3
A
4 11parallel
Strand 4
A
90 93parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 151first strand
Strand 2
A
209 214anti-parallel
Strand 3
A
174 178anti-parallel
Strand 4
A
188 190anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 233first strand
Strand 2
A
219 227anti-parallel
Strand 3
A
237 239anti-parallel
Strand 4
A
259 260anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 233first strand
Strand 2
A
219 227anti-parallel
Strand 3
A
288 296anti-parallel
Strand 4
A
302 308anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 52first strand
Strand 2
B
37 43anti-parallel
Strand 3
B
5 11parallel
Strand 4
B
90 93parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 151first strand
Strand 2
B
209 214anti-parallel
Strand 3
B
174 178anti-parallel
Strand 4
B
188 190anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
232 233first strand
Strand 2
B
219 227anti-parallel
Strand 3
B
237 240anti-parallel
Strand 4
B
258 260anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
232 233first strand
Strand 2
B
219 227anti-parallel
Strand 3
B
288 296anti-parallel
Strand 4
B
302 308anti-parallel
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