Analysis of interatomic Contacts of Structural Units in PDB entry:
7UAA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UAA entry

There are 5 chains in PDB entry 7UAA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 26	LEU 359
B	GLU 30	LEU 359
C	GLU 30	LEU 359
D	GLU 30	ALA 358
E	MET 1	VAL 1578

There are 96 helices in PDB entry 7UAA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	26	30	Right-handed 310
Helix 2	AA2	A	53	58	Right-handed alpha
Helix 3	AA3	A	58	66	Right-handed alpha
Helix 4	AA4	A	67	98	Right-handed alpha
Helix 5	AA5	A	116	129	Right-handed alpha
Helix 6	AA6	A	142	172	Right-handed alpha
Helix 7	AA7	A	177	179	Right-handed 310
Helix 8	AA8	A	271	275	Right-handed 310
Helix 9	AA9	A	331	333	Right-handed 310
Helix 10	AB1	A	345	359	Right-handed alpha
Helix 11	AB2	B	53	58	Right-handed alpha
Helix 12	AB3	B	58	66	Right-handed alpha
Helix 13	AB4	B	67	97	Right-handed alpha
Helix 14	AB5	B	116	130	Right-handed alpha
Helix 15	AB6	B	142	172	Right-handed alpha
Helix 16	AB7	B	177	179	Right-handed 310
Helix 17	AB8	B	265	270	Right-handed 310
Helix 18	AB9	B	271	275	Right-handed 310
Helix 19	AC1	B	331	333	Right-handed 310
Helix 20	AC2	B	345	359	Right-handed alpha
Helix 21	AC3	C	53	58	Right-handed alpha
Helix 22	AC4	C	58	66	Right-handed alpha
Helix 23	AC5	C	67	97	Right-handed alpha
Helix 24	AC6	C	116	129	Right-handed alpha
Helix 25	AC7	C	142	172	Right-handed alpha
Helix 26	AC8	C	177	179	Right-handed 310
Helix 27	AC9	C	265	270	Right-handed 310
Helix 28	AD1	C	271	275	Right-handed 310
Helix 29	AD2	C	331	333	Right-handed 310
Helix 30	AD3	C	345	359	Right-handed alpha
Helix 31	AD4	D	53	58	Right-handed alpha
Helix 32	AD5	D	58	66	Right-handed alpha
Helix 33	AD6	D	67	97	Right-handed alpha
Helix 34	AD7	D	116	129	Right-handed alpha
Helix 35	AD8	D	142	172	Right-handed alpha
Helix 36	AD9	D	174	179	Right-handed alpha
Helix 37	AE1	D	271	275	Right-handed 310
Helix 38	AE2	D	331	333	Right-handed 310
Helix 39	AE3	D	345	358	Right-handed alpha
Helix 40	AE4	E	8	13	Right-handed alpha
Helix 41	AE5	E	20	24	Right-handed 310
Helix 42	AE6	E	26	32	Right-handed alpha
Helix 43	AE7	E	33	55	Right-handed alpha
Helix 44	AE8	E	56	57	Right-handed 310
Helix 45	AE9	E	58	62	Right-handed 310
Helix 46	AF1	E	70	96	Right-handed alpha
Helix 47	AF2	E	107	130	Right-handed alpha
Helix 48	AF3	E	132	134	Right-handed 310
Helix 49	AF4	E	135	160	Right-handed alpha
Helix 50	AF5	E	166	194	Right-handed alpha
Helix 51	AF6	E	207	212	Right-handed alpha
Helix 52	AF7	E	223	230	Right-handed alpha
Helix 53	AF8	E	232	243	Right-handed alpha
Helix 54	AF9	E	254	257	Right-handed 310
Helix 55	AG1	E	258	277	Right-handed alpha
Helix 56	AG2	E	283	314	Right-handed alpha
Helix 57	AG3	E	314	328	Right-handed alpha
Helix 58	AG4	E	347	352	Right-handed alpha
Helix 59	AG5	E	354	401	Right-handed alpha
Helix 60	AG6	E	413	457	Right-handed alpha
Helix 61	AG7	E	458	505	Right-handed alpha
Helix 62	AG8	E	505	512	Right-handed alpha
Helix 63	AG9	E	514	565	Right-handed alpha
Helix 64	AH1	E	572	591	Right-handed alpha
Helix 65	AH2	E	592	615	Right-handed alpha
Helix 66	AH3	E	719	726	Right-handed alpha
Helix 67	AH4	E	783	790	Right-handed alpha
Helix 68	AH5	E	795	807	Right-handed alpha
Helix 69	AH6	E	808	813	Right-handed alpha
Helix 70	AH7	E	817	821	Right-handed 310
Helix 71	AH8	E	831	846	Right-handed alpha
Helix 72	AH9	E	862	880	Right-handed alpha
Helix 73	AI1	E	913	917	Right-handed 310
Helix 74	AI2	E	988	993	Right-handed alpha
Helix 75	AI3	E	997	1008	Right-handed alpha
Helix 76	AI4	E	1010	1042	Right-handed alpha
Helix 77	AI5	E	1066	1106	Right-handed alpha
Helix 78	AI6	E	1109	1116	Right-handed alpha
Helix 79	AI7	E	1119	1135	Right-handed alpha
Helix 80	AI8	E	1135	1161	Right-handed alpha
Helix 81	AI9	E	1163	1195	Right-handed alpha
Helix 82	AJ1	E	1197	1210	Right-handed alpha
Helix 83	AJ2	E	1210	1218	Right-handed alpha
Helix 84	AJ3	E	1219	1271	Right-handed alpha
Helix 85	AJ4	E	1278	1287	Right-handed alpha
Helix 86	AJ5	E	1290	1319	Right-handed alpha
Helix 87	AJ6	E	1382	1393	Right-handed alpha
Helix 88	AJ7	E	1414	1421	Right-handed alpha
Helix 89	AJ8	E	1449	1459	Right-handed alpha
Helix 90	AJ9	E	1460	1467	Right-handed alpha
Helix 91	AK1	E	1469	1473	Right-handed 310
Helix 92	AK2	E	1485	1498	Right-handed alpha
Helix 93	AK3	E	1512	1529	Right-handed alpha
Helix 94	AK4	E	1539	1545	Right-handed alpha
Helix 95	AK5	E	1564	1570	Right-handed alpha
Helix 96	AK6	E	1570	1578	Right-handed alpha

There are 36 sheets in PDB entry 7UAA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	37	first strand
Strand 2	A	40	42	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	47	first strand
Strand 2	B	326	329	parallel
Strand 3	B	319	321	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	183	first strand
Strand 2	A	201	204	anti-parallel
Strand 3	A	255	256	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	260	first strand
Strand 2	A	195	199	anti-parallel
Strand 3	A	187	192	anti-parallel
Strand 4	A	309	311	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	238	first strand
Strand 2	A	210	223	anti-parallel
Strand 3	A	248	249	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	238	first strand
Strand 2	A	210	223	anti-parallel
Strand 3	A	282	291	anti-parallel
Strand 4	A	297	305	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	315	first strand
Strand 2	A	336	338	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	329	first strand
Strand 2	D	44	47	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	37	first strand
Strand 2	B	40	42	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	47	first strand
Strand 2	C	326	329	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	183	first strand
Strand 2	B	202	204	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	195	199	first strand
Strand 2	B	187	192	anti-parallel
Strand 3	B	309	311	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	234	238	first strand
Strand 2	B	210	221	anti-parallel
Strand 3	B	248	249	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	234	238	first strand
Strand 2	B	210	221	anti-parallel
Strand 3	B	282	291	anti-parallel
Strand 4	B	297	305	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	315	first strand
Strand 2	B	336	338	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	37	first strand
Strand 2	C	40	42	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	47	first strand
Strand 2	D	326	329	parallel
Strand 3	D	319	321	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	183	first strand
Strand 2	C	201	204	anti-parallel
Strand 3	C	255	256	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	259	260	first strand
Strand 2	C	195	199	anti-parallel
Strand 3	C	187	192	anti-parallel
Strand 4	C	309	311	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	211	first strand
Strand 2	C	290	291	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	230	238	first strand
Strand 2	C	215	224	anti-parallel
Strand 3	C	282	287	anti-parallel
Strand 4	C	300	305	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	315	first strand
Strand 2	C	336	338	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	37	first strand
Strand 2	D	40	42	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	183	first strand
Strand 2	D	201	204	anti-parallel
Strand 3	D	255	256	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	259	260	first strand
Strand 2	D	195	198	anti-parallel
Strand 3	D	187	192	anti-parallel
Strand 4	D	309	311	parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	230	238	first strand
Strand 2	D	210	224	anti-parallel
Strand 3	D	282	291	anti-parallel
Strand 4	D	297	305	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	313	315	first strand
Strand 2	D	336	338	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	679	681	first strand
Strand 2	E	701	703	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	686	687	first strand
Strand 2	E	731	732	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	709	713	first strand
Strand 2	E	899	903	parallel
Strand 3	E	908	912	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	850	854	first strand
Strand 2	E	883	887	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1348	1351	first strand
Strand 2	E	1400	1402	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1374	1376	first strand
Strand 2	E	1533	1535	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1404	1405	first strand
Strand 2	E	1408	1409	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1422	1424	first strand
Strand 2	E	1502	1504	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1552	1553	first strand
Strand 2	E	1556	1557	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UAA

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UAA