Analysis of interatomic Contacts of Structural Units in PDB entry:
7UAC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UAC entry

There is 1 chain in PDB entry 7UAC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 ALA 35SER 600
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 7UAC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
42 51Right-handed alpha
Helix 2
AA2
H
88 106Right-handed alpha
Helix 3
AA3
H
149 161Right-handed alpha
Helix 4
AA4
H
165 169Right-handed 310
Helix 5
AA5
H
171 174Right-handed 310
Helix 6
AA6
H
180 183Right-handed 310
Helix 7
AA7
H
187 192Right-handed 310
Helix 8
AA8
H
232 238Right-handed 310
Helix 9
AA9
H
246 258Right-handed alpha
Helix 10
AB1
H
275 279Right-handed 310
Helix 11
AB2
H
440 448Right-handed alpha
Helix 12
AB3
H
516 520Right-handed 310
Helix 13
AB4
H
546 550Right-handed alpha
Helix 14
AB5
H
573 577Right-handed alpha
Helix 15
AB6
H
582 586Right-handed 310
Helix 16
AB7
H
597 600Right-handed 310
Back to top of page

There are 9 sheets in PDB entry 7UAC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
110 112first strand
Strand 2
H
79 83parallel
Strand 3
H
120 123parallel
Strand 4
H
139 142parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
176 178first strand
Strand 2
H
228 230anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
265 269first strand
Strand 2
H
418 427anti-parallel
Strand 3
H
314 318anti-parallel
Strand 4
H
290 292anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
265 269first strand
Strand 2
H
418 427anti-parallel
Strand 3
H
342 350anti-parallel
Strand 4
H
389 395anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
280 281first strand
Strand 2
H
327 331anti-parallel
Strand 3
H
401 408anti-parallel
Strand 4
H
357 365anti-parallel
Strand 5
H
371 381anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
434 438first strand
Strand 2
H
587 595anti-parallel
Strand 3
H
504 510anti-parallel
Strand 4
H
523 528anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
454 455first strand
Strand 2
H
466 472anti-parallel
Strand 3
H
459 460anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
454 455first strand
Strand 2
H
466 472anti-parallel
Strand 3
H
481 489anti-parallel
Strand 4
H
565 572anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
551 554first strand
Strand 2
H
559 562anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il