Analysis of interatomic Contacts of Structural Units in PDB entry:
7UAD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UAD entry

There is 1 chain in PDB entry 7UAD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7UAD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 15Right-handed alpha
Helix 2
AA2
A
17 29Right-handed alpha
Helix 3
AA3
A
39 46Right-handed 310
Helix 4
AA4
A
90 92Right-handed 310
Helix 5
AA5
A
93 104Right-handed alpha
Helix 6
AA6
A
188 202Right-handed alpha
Helix 7
AA7
A
220 236Right-handed alpha
Helix 8
AA8
A
237 239Right-handed 310
Helix 9
AA9
A
243 252Right-handed alpha
Helix 10
AB1
A
261 276Right-handed alpha
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There are 2 sheets in PDB entry 7UAD. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
68 76anti-parallel
Strand 3
A
81 86anti-parallel
Strand 4
A
212 215parallel
Strand 5
A
108 111parallel
Strand 6
A
168 177parallel
Strand 7
A
154 163anti-parallel
Strand 8
A
141 150anti-parallel
Strand 9
A
134 136anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 117first strand
Strand 2
A
120 121anti-parallel
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