Analysis of interatomic Contacts of Structural Units in PDB entry:
7UAE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UAE entry

There is 1 chain in PDB entry 7UAE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 66SER 600
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7UAE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
70 74Right-handed 310
Helix 2
AA2
A
88 106Right-handed alpha
Helix 3
AA3
A
149 162Right-handed alpha
Helix 4
AA4
A
165 169Right-handed 310
Helix 5
AA5
A
171 174Right-handed 310
Helix 6
AA6
A
180 183Right-handed 310
Helix 7
AA7
A
187 192Right-handed 310
Helix 8
AA8
A
232 238Right-handed 310
Helix 9
AA9
A
246 258Right-handed alpha
Helix 10
AB1
A
275 279Right-handed 310
Helix 11
AB2
A
411 415Right-handed 310
Helix 12
AB3
A
440 448Right-handed alpha
Helix 13
AB4
A
493 497Right-handed 310
Helix 14
AB5
A
516 520Right-handed 310
Helix 15
AB6
A
535 539Right-handed 310
Helix 16
AB7
A
546 551Right-handed alpha
Helix 17
AB8
A
573 577Right-handed alpha
Helix 18
AB9
A
597 600Right-handed 310
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There are 10 sheets in PDB entry 7UAE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 68first strand
Strand 2
A
199 200anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 112first strand
Strand 2
A
79 83parallel
Strand 3
A
120 123parallel
Strand 4
A
139 142parallel
Strand 5
A
129 130anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 178first strand
Strand 2
A
228 230anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 269first strand
Strand 2
A
418 427anti-parallel
Strand 3
A
314 318anti-parallel
Strand 4
A
290 292anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 269first strand
Strand 2
A
418 427anti-parallel
Strand 3
A
342 350anti-parallel
Strand 4
A
389 395anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 281first strand
Strand 2
A
327 331anti-parallel
Strand 3
A
401 408anti-parallel
Strand 4
A
357 365anti-parallel
Strand 5
A
371 381anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
434 438first strand
Strand 2
A
587 595anti-parallel
Strand 3
A
504 510anti-parallel
Strand 4
A
523 528anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 455first strand
Strand 2
A
466 472anti-parallel
Strand 3
A
459 460anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 455first strand
Strand 2
A
466 472anti-parallel
Strand 3
A
481 489anti-parallel
Strand 4
A
565 572anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
552 553first strand
Strand 2
A
560 561anti-parallel
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