Analysis of interatomic Contacts of Structural Units in PDB entry:
7UAI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UAI entry

There are 6 chains in PDB entry 7UAI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	ASN 66	SER 600
A	LEU 31	PRO 382
B	ASN 66	SER 600
C	ASN 66	SER 600
D	ASN 66	SER 600
H	LEU 31	PRO 382

There are 85 helices in PDB entry 7UAI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	70	74	Right-handed 310
Helix 2	AA2	E	88	106	Right-handed alpha
Helix 3	AA3	E	149	162	Right-handed alpha
Helix 4	AA4	E	165	169	Right-handed 310
Helix 5	AA5	E	171	174	Right-handed 310
Helix 6	AA6	E	180	183	Right-handed 310
Helix 7	AA7	E	187	192	Right-handed 310
Helix 8	AA8	E	232	238	Right-handed 310
Helix 9	AA9	E	246	258	Right-handed alpha
Helix 10	AB1	E	275	279	Right-handed 310
Helix 11	AB2	E	411	415	Right-handed 310
Helix 12	AB3	E	440	448	Right-handed alpha
Helix 13	AB4	E	493	497	Right-handed 310
Helix 14	AB5	E	516	520	Right-handed 310
Helix 15	AB6	E	535	539	Right-handed 310
Helix 16	AB7	E	546	551	Right-handed alpha
Helix 17	AB8	E	573	577	Right-handed alpha
Helix 18	AB9	E	597	600	Right-handed 310
Helix 19	AC1	A	38	56	Right-handed alpha
Helix 20	AC2	A	100	104	Right-handed 310
Helix 21	AC3	A	108	111	Right-handed 310
Helix 22	AC4	A	143	151	Right-handed alpha
Helix 23	AC5	A	164	182	Right-handed alpha
Helix 24	AC6	A	342	345	Right-handed 310
Helix 25	AC7	A	376	380	Right-handed 310
Helix 26	AC8	B	70	74	Right-handed 310
Helix 27	AC9	B	88	106	Right-handed alpha
Helix 28	AD1	B	149	161	Right-handed alpha
Helix 29	AD2	B	165	169	Right-handed 310
Helix 30	AD3	B	171	174	Right-handed 310
Helix 31	AD4	B	180	183	Right-handed 310
Helix 32	AD5	B	187	192	Right-handed 310
Helix 33	AD6	B	232	238	Right-handed 310
Helix 34	AD7	B	246	258	Right-handed alpha
Helix 35	AD8	B	275	279	Right-handed 310
Helix 36	AD9	B	411	415	Right-handed 310
Helix 37	AE1	B	440	448	Right-handed alpha
Helix 38	AE2	B	516	520	Right-handed 310
Helix 39	AE3	B	535	539	Right-handed 310
Helix 40	AE4	B	546	551	Right-handed alpha
Helix 41	AE5	B	573	577	Right-handed alpha
Helix 42	AE6	B	578	581	Right-handed 310
Helix 43	AE7	B	597	600	Right-handed 310
Helix 44	AE8	C	70	74	Right-handed 310
Helix 45	AE9	C	88	106	Right-handed alpha
Helix 46	AF1	C	149	162	Right-handed alpha
Helix 47	AF2	C	165	169	Right-handed 310
Helix 48	AF3	C	171	174	Right-handed 310
Helix 49	AF4	C	180	183	Right-handed 310
Helix 50	AF5	C	187	192	Right-handed 310
Helix 51	AF6	C	234	239	Right-handed alpha
Helix 52	AF7	C	246	258	Right-handed alpha
Helix 53	AF8	C	275	279	Right-handed 310
Helix 54	AF9	C	411	415	Right-handed 310
Helix 55	AG1	C	440	448	Right-handed alpha
Helix 56	AG2	C	493	497	Right-handed 310
Helix 57	AG3	C	546	551	Right-handed alpha
Helix 58	AG4	C	573	577	Right-handed alpha
Helix 59	AG5	C	597	600	Right-handed 310
Helix 60	AG6	D	70	74	Right-handed 310
Helix 61	AG7	D	88	106	Right-handed alpha
Helix 62	AG8	D	149	161	Right-handed alpha
Helix 63	AG9	D	165	169	Right-handed 310
Helix 64	AH1	D	171	174	Right-handed 310
Helix 65	AH2	D	180	183	Right-handed 310
Helix 66	AH3	D	187	192	Right-handed 310
Helix 67	AH4	D	232	238	Right-handed 310
Helix 68	AH5	D	246	258	Right-handed alpha
Helix 69	AH6	D	275	279	Right-handed 310
Helix 70	AH7	D	411	415	Right-handed 310
Helix 71	AH8	D	440	448	Right-handed alpha
Helix 72	AH9	D	493	497	Right-handed 310
Helix 73	AI1	D	535	539	Right-handed 310
Helix 74	AI2	D	546	551	Right-handed alpha
Helix 75	AI3	D	573	578	Right-handed alpha
Helix 76	AI4	D	579	581	Right-handed 310
Helix 77	AI5	D	597	600	Right-handed 310
Helix 78	AI6	H	38	56	Right-handed alpha
Helix 79	AI7	H	96	98	Right-handed 310
Helix 80	AI8	H	100	104	Right-handed 310
Helix 81	AI9	H	108	111	Right-handed 310
Helix 82	AJ1	H	143	151	Right-handed alpha
Helix 83	AJ2	H	164	182	Right-handed alpha
Helix 84	AJ3	H	342	345	Right-handed 310
Helix 85	AJ4	H	360	364	Right-handed 310

There are 48 sheets in PDB entry 7UAI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	67	68	first strand
Strand 2	E	199	200	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	110	112	first strand
Strand 2	E	79	83	parallel
Strand 3	E	120	123	parallel
Strand 4	E	139	143	parallel
Strand 5	E	128	130	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	176	178	first strand
Strand 2	E	228	230	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	265	269	first strand
Strand 2	E	418	427	anti-parallel
Strand 3	E	313	318	anti-parallel
Strand 4	E	290	293	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	265	269	first strand
Strand 2	E	418	427	anti-parallel
Strand 3	E	342	350	anti-parallel
Strand 4	E	389	395	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	280	281	first strand
Strand 2	E	327	331	anti-parallel
Strand 3	E	401	408	anti-parallel
Strand 4	E	357	365	anti-parallel
Strand 5	E	371	381	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	434	438	first strand
Strand 2	E	587	595	anti-parallel
Strand 3	E	504	510	anti-parallel
Strand 4	E	523	528	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	454	455	first strand
Strand 2	E	466	472	anti-parallel
Strand 3	E	459	460	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	454	455	first strand
Strand 2	E	466	472	anti-parallel
Strand 3	E	481	488	anti-parallel
Strand 4	E	565	572	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	552	554	first strand
Strand 2	E	559	561	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	33	first strand
Strand 2	A	60	73	anti-parallel
Strand 3	A	80	94	anti-parallel
Strand 4	A	113	124	anti-parallel
Strand 5	A	129	141	anti-parallel
Strand 6	A	302	306	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	157	first strand
Strand 2	A	187	198	anti-parallel
Strand 3	A	204	213	anti-parallel
Strand 4	A	235	244	anti-parallel
Strand 5	A	247	252	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	157	first strand
Strand 2	A	187	198	anti-parallel
Strand 3	A	204	213	anti-parallel
Strand 4	A	235	244	anti-parallel
Strand 5	A	255	256	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	337	340	first strand
Strand 2	A	352	355	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	67	68	first strand
Strand 2	B	199	200	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	112	first strand
Strand 2	B	79	83	parallel
Strand 3	B	120	123	parallel
Strand 4	B	139	142	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	178	first strand
Strand 2	B	228	230	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	269	first strand
Strand 2	B	418	427	anti-parallel
Strand 3	B	314	318	anti-parallel
Strand 4	B	290	292	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	269	first strand
Strand 2	B	418	427	anti-parallel
Strand 3	B	342	350	anti-parallel
Strand 4	B	389	395	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	280	281	first strand
Strand 2	B	327	331	anti-parallel
Strand 3	B	401	408	anti-parallel
Strand 4	B	357	365	anti-parallel
Strand 5	B	371	381	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	434	439	first strand
Strand 2	B	586	595	anti-parallel
Strand 3	B	504	510	anti-parallel
Strand 4	B	523	528	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	454	455	first strand
Strand 2	B	466	472	anti-parallel
Strand 3	B	459	460	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	454	455	first strand
Strand 2	B	466	472	anti-parallel
Strand 3	B	481	488	anti-parallel
Strand 4	B	565	572	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	552	554	first strand
Strand 2	B	559	561	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	67	68	first strand
Strand 2	C	199	200	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	112	first strand
Strand 2	C	79	83	parallel
Strand 3	C	120	123	parallel
Strand 4	C	139	143	parallel
Strand 5	C	128	130	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	178	first strand
Strand 2	C	228	230	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	265	269	first strand
Strand 2	C	418	427	anti-parallel
Strand 3	C	314	318	anti-parallel
Strand 4	C	290	292	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	265	269	first strand
Strand 2	C	418	427	anti-parallel
Strand 3	C	342	349	anti-parallel
Strand 4	C	389	395	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	280	281	first strand
Strand 2	C	327	331	anti-parallel
Strand 3	C	401	408	anti-parallel
Strand 4	C	357	365	anti-parallel
Strand 5	C	371	380	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	434	438	first strand
Strand 2	C	587	595	anti-parallel
Strand 3	C	504	510	anti-parallel
Strand 4	C	523	528	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	454	455	first strand
Strand 2	C	466	472	anti-parallel
Strand 3	C	459	460	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	454	455	first strand
Strand 2	C	466	472	anti-parallel
Strand 3	C	481	488	anti-parallel
Strand 4	C	565	572	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	534	535	first strand
Strand 2	C	541	542	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	552	554	first strand
Strand 2	C	559	561	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	67	68	first strand
Strand 2	D	199	200	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	112	first strand
Strand 2	D	79	83	parallel
Strand 3	D	120	123	parallel
Strand 4	D	139	143	parallel
Strand 5	D	128	130	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	176	178	first strand
Strand 2	D	228	230	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	265	269	first strand
Strand 2	D	418	427	anti-parallel
Strand 3	D	313	318	anti-parallel
Strand 4	D	290	293	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	265	269	first strand
Strand 2	D	418	427	anti-parallel
Strand 3	D	342	350	anti-parallel
Strand 4	D	389	395	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	280	281	first strand
Strand 2	D	327	331	anti-parallel
Strand 3	D	401	408	anti-parallel
Strand 4	D	357	365	anti-parallel
Strand 5	D	371	381	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	434	438	first strand
Strand 2	D	587	595	anti-parallel
Strand 3	D	504	510	anti-parallel
Strand 4	D	523	528	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	454	455	first strand
Strand 2	D	466	472	anti-parallel
Strand 3	D	459	460	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	454	455	first strand
Strand 2	D	466	472	anti-parallel
Strand 3	D	481	488	anti-parallel
Strand 4	D	565	572	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	552	554	first strand
Strand 2	D	559	561	anti-parallel

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There are 6 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	32	34	first strand
Strand 2	H	60	74	anti-parallel
Strand 3	H	80	94	anti-parallel
Strand 4	H	113	124	anti-parallel
Strand 5	H	129	141	anti-parallel
Strand 6	H	301	306	parallel

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There are 5 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	156	157	first strand
Strand 2	H	186	198	anti-parallel
Strand 3	H	204	214	anti-parallel
Strand 4	H	235	243	anti-parallel
Strand 5	H	248	256	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	337	340	first strand
Strand 2	H	352	355	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UAI

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UAI