Analysis of interatomic Contacts of Structural Units in PDB entry:
7UC8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UC8 entry

There are 3 chains in PDB entry 7UC8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 556	GLU 886
B	LEU 557	GLU 886
C	LEU 557	ASN 585

There are 24 helices in PDB entry 7UC8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	575	579	Right-handed 310
Helix 2	AA2	A	663	667	Right-handed alpha
Helix 3	AA3	A	682	685	Right-handed 310
Helix 4	AA4	A	762	767	Right-handed alpha
Helix 5	AA5	A	823	828	Right-handed alpha
Helix 6	AA6	B	575	579	Right-handed 310
Helix 7	AA7	B	663	667	Right-handed alpha
Helix 8	AA8	B	682	685	Right-handed 310
Helix 9	AA9	B	761	767	Right-handed alpha
Helix 10	AB1	B	823	828	Right-handed alpha
Helix 11	AB2	C	575	579	Right-handed 310
Helix 12	AB3	C	663	667	Right-handed alpha
Helix 13	AB4	C	682	685	Right-handed 310
Helix 14	AB5	C	761	767	Right-handed alpha
Helix 15	AB6	C	823	828	Right-handed alpha
Helix 16	AB7	H	73	75	Right-handed 310
Helix 17	AB8	H	86	90	Right-handed 310
Helix 18	AB9	H	226	230	Right-handed 310
Helix 19	AC1	I	73	75	Right-handed 310
Helix 20	AC2	I	86	90	Right-handed 310
Helix 21	AC3	I	226	230	Right-handed 310
Helix 22	AC4	J	73	75	Right-handed 310
Helix 23	AC5	J	86	90	Right-handed 310
Helix 24	AC6	J	226	230	Right-handed 310

There are 42 sheets in PDB entry 7UC8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	580	583	first strand
Strand 2	A	608	615	parallel
Strand 3	A	720	727	parallel
Strand 4	A	700	707	anti-parallel
Strand 5	A	640	642	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	585	587	first strand
Strand 2	A	590	594	anti-parallel
Strand 3	A	621	625	parallel
Strand 4	A	687	691	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	649	653	first strand
Strand 2	A	658	662	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	675	676	first strand
Strand 2	A	679	680	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	712	713	first strand
Strand 2	A	716	717	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	768	773	first strand
Strand 2	A	734	740	parallel
Strand 3	A	790	794	parallel
Strand 4	A	845	849	anti-parallel
Strand 5	A	832	834	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	781	785	first strand
Strand 2	A	877	884	parallel
Strand 3	A	858	865	anti-parallel
Strand 4	A	801	802	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	781	785	first strand
Strand 2	A	877	884	parallel
Strand 3	A	858	865	anti-parallel
Strand 4	A	809	810	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	580	583	first strand
Strand 2	B	608	615	parallel
Strand 3	B	720	727	parallel
Strand 4	B	700	707	anti-parallel
Strand 5	B	640	642	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	585	587	first strand
Strand 2	B	590	594	anti-parallel
Strand 3	B	621	625	parallel
Strand 4	B	687	691	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	649	654	first strand
Strand 2	B	657	662	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	675	676	first strand
Strand 2	B	679	680	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	712	713	first strand
Strand 2	B	716	717	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	768	772	first strand
Strand 2	B	734	739	parallel
Strand 3	B	790	794	parallel
Strand 4	B	845	849	anti-parallel
Strand 5	B	832	834	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	781	785	first strand
Strand 2	B	877	884	parallel
Strand 3	B	858	865	anti-parallel
Strand 4	B	801	802	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	781	785	first strand
Strand 2	B	877	884	parallel
Strand 3	B	858	865	anti-parallel
Strand 4	B	809	810	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	583	first strand
Strand 2	C	608	615	parallel
Strand 3	C	720	727	parallel
Strand 4	C	700	707	anti-parallel
Strand 5	C	640	642	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	583	first strand
Strand 2	C	608	615	parallel
Strand 3	C	720	727	parallel
Strand 4	C	700	707	anti-parallel
Strand 5	C	649	654	anti-parallel
Strand 6	C	657	662	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	585	587	first strand
Strand 2	C	590	594	anti-parallel
Strand 3	C	621	625	parallel
Strand 4	C	687	691	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	675	676	first strand
Strand 2	C	679	680	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	712	713	first strand
Strand 2	C	716	717	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	768	772	first strand
Strand 2	C	734	739	parallel
Strand 3	C	790	794	parallel
Strand 4	C	845	849	anti-parallel
Strand 5	C	832	834	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	781	785	first strand
Strand 2	C	877	884	parallel
Strand 3	C	858	865	anti-parallel
Strand 4	C	801	802	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	781	785	first strand
Strand 2	C	877	884	parallel
Strand 3	C	858	865	anti-parallel
Strand 4	C	809	810	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	8	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	72	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	120	124	parallel
Strand 3	H	91	98	anti-parallel
Strand 4	H	33	40	anti-parallel
Strand 5	H	44	51	anti-parallel
Strand 6	H	57	59	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	120	124	parallel
Strand 3	H	91	98	anti-parallel
Strand 4	H	113	116	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	150	153	first strand
Strand 2	H	165	175	anti-parallel
Strand 3	H	209	222	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	156	158	first strand
Strand 2	H	249	252	parallel
Strand 3	H	232	237	anti-parallel
Strand 4	H	180	185	anti-parallel
Strand 5	H	192	196	anti-parallel
Strand 6	H	200	201	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	156	158	first strand
Strand 2	H	249	252	parallel
Strand 3	H	232	237	anti-parallel
Strand 4	H	244	245	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	3	8	first strand
Strand 2	I	18	25	anti-parallel
Strand 3	I	77	82	anti-parallel
Strand 4	I	67	72	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	11	12	first strand
Strand 2	I	120	124	parallel
Strand 3	I	91	98	anti-parallel
Strand 4	I	33	40	anti-parallel
Strand 5	I	44	51	anti-parallel
Strand 6	I	57	59	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	11	12	first strand
Strand 2	I	120	124	parallel
Strand 3	I	91	98	anti-parallel
Strand 4	I	113	116	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	150	153	first strand
Strand 2	I	165	175	anti-parallel
Strand 3	I	209	222	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	156	159	first strand
Strand 2	I	249	253	parallel
Strand 3	I	232	237	anti-parallel
Strand 4	I	180	185	anti-parallel
Strand 5	I	192	196	anti-parallel
Strand 6	I	200	201	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	156	159	first strand
Strand 2	I	249	253	parallel
Strand 3	I	232	237	anti-parallel
Strand 4	I	244	245	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	3	8	first strand
Strand 2	J	18	25	anti-parallel
Strand 3	J	77	82	anti-parallel
Strand 4	J	67	72	anti-parallel

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There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	11	12	first strand
Strand 2	J	120	124	parallel
Strand 3	J	91	98	anti-parallel
Strand 4	J	33	40	anti-parallel
Strand 5	J	44	51	anti-parallel
Strand 6	J	57	59	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	11	12	first strand
Strand 2	J	120	124	parallel
Strand 3	J	91	98	anti-parallel
Strand 4	J	113	116	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	150	153	first strand
Strand 2	J	165	171	anti-parallel
Strand 3	J	217	222	anti-parallel
Strand 4	J	209	214	anti-parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	156	158	first strand
Strand 2	J	249	252	parallel
Strand 3	J	232	237	anti-parallel
Strand 4	J	180	185	anti-parallel
Strand 5	J	192	196	anti-parallel
Strand 6	J	200	201	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	156	158	first strand
Strand 2	J	249	252	parallel
Strand 3	J	232	237	anti-parallel
Strand 4	J	244	245	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UC8

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UC8