Analysis of interatomic Contacts of Structural Units in PDB entry:
7UCL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UCL entry

There are 2 chains in PDB entry 7UCL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN -1LYS 626
B
 ASN -1LYS 626
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 7UCL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 25Right-handed alpha
Helix 2
AA2
A
25 33Right-handed alpha
Helix 3
AA3
A
37 46Right-handed alpha
Helix 4
AA4
A
48 62Right-handed alpha
Helix 5
AA5
A
77 85Right-handed 310
Helix 6
AA6
A
86 95Right-handed 310
Helix 7
AA7
A
96 102Right-handed alpha
Helix 8
AA8
A
109 118Right-handed alpha
Helix 9
AA9
A
119 122Right-handed 310
Helix 10
AB1
A
124 146Right-handed alpha
Helix 11
AB2
A
162 176Right-handed alpha
Helix 12
AB3
A
181 185Right-handed 310
Helix 13
AB4
A
189 199Right-handed alpha
Helix 14
AB5
A
202 208Right-handed alpha
Helix 15
AB6
A
208 213Right-handed alpha
Helix 16
AB7
A
214 221Right-handed alpha
Helix 17
AB8
A
222 226Right-handed 310
Helix 18
AB9
A
239 256Right-handed alpha
Helix 19
AC1
A
258 267Right-handed alpha
Helix 20
AC2
A
270 274Right-handed 310
Helix 21
AC3
A
286 300Right-handed alpha
Helix 22
AC4
A
301 305Right-handed 310
Helix 23
AC5
A
319 330Right-handed alpha
Helix 24
AC6
A
344 355Right-handed alpha
Helix 25
AC7
A
359 361Right-handed 310
Helix 26
AC8
A
381 388Right-handed alpha
Helix 27
AC9
A
406 423Right-handed alpha
Helix 28
AD1
A
439 446Right-handed alpha
Helix 29
AD2
A
451 462Right-handed alpha
Helix 30
AD3
A
468 479Right-handed alpha
Helix 31
AD4
A
485 488Right-handed 310
Helix 32
AD5
A
516 518Right-handed 310
Helix 33
AD6
A
519 531Right-handed alpha
Helix 34
AD7
A
538 549Right-handed alpha
Helix 35
AD8
A
604 607Right-handed 310
Helix 36
AD9
A
610 626Right-handed alpha
Helix 37
AE1
B
1 25Right-handed alpha
Helix 38
AE2
B
25 33Right-handed alpha
Helix 39
AE3
B
37 46Right-handed alpha
Helix 40
AE4
B
48 62Right-handed alpha
Helix 41
AE5
B
77 85Right-handed 310
Helix 42
AE6
B
86 95Right-handed 310
Helix 43
AE7
B
96 102Right-handed alpha
Helix 44
AE8
B
109 118Right-handed alpha
Helix 45
AE9
B
124 146Right-handed alpha
Helix 46
AF1
B
162 176Right-handed alpha
Helix 47
AF2
B
189 198Right-handed alpha
Helix 48
AF3
B
199 201Right-handed 310
Helix 49
AF4
B
202 208Right-handed alpha
Helix 50
AF5
B
208 214Right-handed alpha
Helix 51
AF6
B
214 221Right-handed alpha
Helix 52
AF7
B
239 251Right-handed alpha
Helix 53
AF8
B
251 257Right-handed alpha
Helix 54
AF9
B
257 268Right-handed alpha
Helix 55
AG1
B
270 274Right-handed 310
Helix 56
AG2
B
286 300Right-handed alpha
Helix 57
AG3
B
301 306Right-handed 310
Helix 58
AG4
B
319 330Right-handed alpha
Helix 59
AG5
B
344 355Right-handed alpha
Helix 60
AG6
B
359 361Right-handed 310
Helix 61
AG7
B
381 388Right-handed alpha
Helix 62
AG8
B
406 423Right-handed alpha
Helix 63
AG9
B
439 446Right-handed alpha
Helix 64
AH1
B
447 450Right-handed 310
Helix 65
AH2
B
451 462Right-handed alpha
Helix 66
AH3
B
468 478Right-handed alpha
Helix 67
AH4
B
516 518Right-handed 310
Helix 68
AH5
B
519 531Right-handed alpha
Helix 69
AH6
B
532 536Right-handed 310
Helix 70
AH7
B
538 549Right-handed alpha
Helix 71
AH8
B
604 607Right-handed 310
Helix 72
AH9
B
610 626Right-handed alpha
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There are 11 sheets in PDB entry 7UCL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 67first strand
Strand 2
A
73 75anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 180first strand
Strand 2
A
187 188anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 339first strand
Strand 2
A
312 317parallel
Strand 3
A
277 281parallel
Strand 4
A
363 368parallel
Strand 5
A
430 435parallel
Strand 6
A
500 507anti-parallel
Strand 7
A
481 483anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 339first strand
Strand 2
A
312 317parallel
Strand 3
A
277 281parallel
Strand 4
A
363 368parallel
Strand 5
A
430 435parallel
Strand 6
A
500 507anti-parallel
Strand 7
A
489 491anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 398first strand
Strand 2
A
404 405anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 514first strand
Strand 2
A
553 557anti-parallel
Strand 3
A
562 572anti-parallel
Strand 4
A
594 602anti-parallel
Strand 5
B
594 602anti-parallel
Strand 6
B
562 572anti-parallel
Strand 7
B
553 557anti-parallel
Strand 8
B
511 514anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 67first strand
Strand 2
B
73 75anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 182first strand
Strand 2
B
185 188anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
335 339first strand
Strand 2
B
312 317parallel
Strand 3
B
277 281parallel
Strand 4
B
363 368parallel
Strand 5
B
430 435parallel
Strand 6
B
500 507anti-parallel
Strand 7
B
481 483anti-parallel
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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
335 339first strand
Strand 2
B
312 317parallel
Strand 3
B
277 281parallel
Strand 4
B
363 368parallel
Strand 5
B
430 435parallel
Strand 6
B
500 507anti-parallel
Strand 7
B
489 491anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
397 398first strand
Strand 2
B
404 405anti-parallel
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