Analysis of interatomic Contacts of Structural Units in PDB entry:
7UE8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UE8 entry

There is 1 chain in PDB entry 7UE8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 11PHE 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 7UE8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 40Right-handed alpha
Helix 2
AA2
A
42 55Right-handed alpha
Helix 3
AA3
A
66 69Right-handed 310
Helix 4
AA4
A
91 100Right-handed alpha
Helix 5
AA5
A
115 121Right-handed alpha
Helix 6
AA6
A
121 126Right-handed alpha
Helix 7
AA7
A
137 153Right-handed alpha
Helix 8
AA8
A
214 227Right-handed alpha
Helix 9
AA9
A
230 241Right-handed alpha
Helix 10
AB1
A
242 246Right-handed 310
Helix 11
AB2
A
250 255Right-handed alpha
Helix 12
AB3
A
258 262Right-handed 310
Helix 13
AB4
A
272 276Right-handed 310
Helix 14
AB5
A
277 284Right-handed alpha
Helix 15
AB6
A
285 313Right-handed alpha
Helix 16
AB7
A
321 325Right-handed 310
Helix 17
AB8
A
327 342Right-handed alpha
Helix 18
AB9
A
356 365Right-handed alpha
Helix 19
AC1
A
366 369Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 7UE8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
62 64anti-parallel
Strand 3
A
78 88anti-parallel
Strand 4
A
70 75anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
62 64anti-parallel
Strand 3
A
78 88anti-parallel
Strand 4
A
22 30anti-parallel
Strand 5
A
13 18anti-parallel
Strand 6
A
110 114parallel
Strand 7
A
132 135parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 176first strand
Strand 2
A
160 164anti-parallel
Strand 3
A
347 351anti-parallel
Strand 4
A
316 320parallel
Strand 5
A
185 190parallel
Strand 6
A
194 201anti-parallel
Strand 7
A
204 211anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 249first strand
Strand 2
A
268 270anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il