Analysis of interatomic Contacts of Structural Units in PDB entry:
7UE9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UE9 entry

There are 3 chains in PDB entry 7UE9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
L	ASP 1	CYS 219
H	VAL 2	GLY 214
C	GLY 0	ARG 310

There are 28 helices in PDB entry 7UE9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	L	84	88	Right-handed 310
Helix 2	AA2	L	126	132	Right-handed alpha
Helix 3	AA3	L	188	193	Right-handed alpha
Helix 4	AA4	H	28	32	Right-handed 310
Helix 5	AA5	H	62	65	Right-handed 310
Helix 6	AA6	H	74	76	Right-handed 310
Helix 7	AA7	H	87	91	Right-handed 310
Helix 8	AA8	H	154	156	Right-handed 310
Helix 9	AA9	H	185	187	Right-handed 310
Helix 10	AB1	H	199	202	Right-handed 310
Helix 11	AB2	C	3	11	Right-handed 310
Helix 12	AB3	C	19	38	Right-handed alpha
Helix 13	AB4	C	40	45	Right-handed alpha
Helix 14	AB5	C	46	65	Right-handed alpha
Helix 15	AB6	C	82	96	Right-handed alpha
Helix 16	AB7	C	97	99	Right-handed 310
Helix 17	AB8	C	103	119	Right-handed alpha
Helix 18	AB9	C	133	142	Right-handed 310
Helix 19	AC1	C	145	166	Right-handed alpha
Helix 20	AC2	C	167	169	Right-handed 310
Helix 21	AC3	C	171	187	Right-handed alpha
Helix 22	AC4	C	188	190	Right-handed 310
Helix 23	AC5	C	192	205	Right-handed alpha
Helix 24	AC6	C	210	221	Right-handed alpha
Helix 25	AC7	C	232	251	Right-handed alpha
Helix 26	AC8	C	252	254	Right-handed 310
Helix 27	AC9	C	255	266	Right-handed alpha
Helix 28	AD1	C	275	293	Right-handed alpha

There are 10 sheets in PDB entry 7UE9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	7	first strand
Strand 2	L	19	25	anti-parallel
Strand 3	L	75	80	anti-parallel
Strand 4	L	67	72	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	13	first strand
Strand 2	L	107	111	parallel
Strand 3	L	89	95	anti-parallel
Strand 4	L	38	43	anti-parallel
Strand 5	L	50	54	anti-parallel
Strand 6	L	58	59	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	13	first strand
Strand 2	L	107	111	parallel
Strand 3	L	89	95	anti-parallel
Strand 4	L	102	103	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	119	123	first strand
Strand 2	L	134	144	anti-parallel
Strand 3	L	178	187	anti-parallel
Strand 4	L	164	168	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	158	159	first strand
Strand 2	L	150	155	anti-parallel
Strand 3	L	196	202	anti-parallel
Strand 4	L	210	215	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	6	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	105	109	parallel
Strand 3	H	92	97	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	58	60	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	118	122	first strand
Strand 2	H	133	143	anti-parallel
Strand 3	H	174	183	anti-parallel
Strand 4	H	161	163	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	118	122	first strand
Strand 2	H	133	143	anti-parallel
Strand 3	H	174	183	anti-parallel
Strand 4	H	167	168	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	149	152	first strand
Strand 2	H	193	198	anti-parallel
Strand 3	H	203	208	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UE9

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UE9