Analysis of interatomic Contacts of Structural Units in PDB entry:
7UEA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UEA entry

There are 9 chains in PDB entry 7UEA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 58	SER 709
a	THR 59	VAL 708
B	PRO 4	ARG 228
C	LEU 9	LYS 125
c	GLY 21	LYS 125
D	GLY 21	PHE 120
U	LEU 3	GLN 366
V	ASN 7	GLN 366
W	ASP 8	GLN 366

There are 94 helices in PDB entry 7UEA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	66	70	Right-handed 310
Helix 2	AA2	A	71	97	Right-handed alpha
Helix 3	AA3	A	111	124	Right-handed alpha
Helix 4	AA4	A	132	167	Right-handed alpha
Helix 5	AA5	A	188	194	Right-handed alpha
Helix 6	AA6	A	201	227	Right-handed alpha
Helix 7	AA7	A	241	263	Right-handed alpha
Helix 8	AA8	A	267	273	Right-handed alpha
Helix 9	AA9	A	273	302	Right-handed alpha
Helix 10	AB1	A	306	311	Right-handed alpha
Helix 11	AB2	A	311	316	Right-handed alpha
Helix 12	AB3	A	358	363	Right-handed alpha
Helix 13	AB4	A	363	401	Right-handed alpha
Helix 14	AB5	A	402	407	Right-handed 310
Helix 15	AB6	A	409	417	Right-handed alpha
Helix 16	AB7	A	417	452	Right-handed alpha
Helix 17	AB8	A	457	461	Right-handed 310
Helix 18	AB9	A	468	475	Right-handed 310
Helix 19	AC1	A	479	506	Right-handed alpha
Helix 20	AC2	A	510	516	Right-handed alpha
Helix 21	AC3	A	530	534	Right-handed 310
Helix 22	AC4	A	539	564	Right-handed alpha
Helix 23	AC5	A	576	581	Right-handed alpha
Helix 24	AC6	A	581	587	Right-handed alpha
Helix 25	AC7	A	595	610	Right-handed alpha
Helix 26	AC8	A	610	632	Right-handed alpha
Helix 27	AC9	A	634	651	Right-handed alpha
Helix 28	AD1	A	669	696	Right-handed alpha
Helix 29	AD2	a	60	64	Right-handed 310
Helix 30	AD3	a	66	70	Right-handed 310
Helix 31	AD4	a	71	96	Right-handed alpha
Helix 32	AD5	a	111	125	Right-handed alpha
Helix 33	AD6	a	132	166	Right-handed alpha
Helix 34	AD7	a	186	191	Right-handed alpha
Helix 35	AD8	a	192	197	Right-handed 310
Helix 36	AD9	a	201	227	Right-handed alpha
Helix 37	AE1	a	238	263	Right-handed alpha
Helix 38	AE2	a	267	271	Right-handed 310
Helix 39	AE3	a	274	302	Right-handed alpha
Helix 40	AE4	a	303	305	Right-handed 310
Helix 41	AE5	a	306	311	Right-handed alpha
Helix 42	AE6	a	311	316	Right-handed alpha
Helix 43	AE7	a	358	363	Right-handed alpha
Helix 44	AE8	a	363	401	Right-handed alpha
Helix 45	AE9	a	403	407	Right-handed 310
Helix 46	AF1	a	409	417	Right-handed alpha
Helix 47	AF2	a	419	452	Right-handed alpha
Helix 48	AF3	a	453	456	Right-handed 310
Helix 49	AF4	a	457	461	Right-handed 310
Helix 50	AF5	a	471	475	Right-handed 310
Helix 51	AF6	a	479	506	Right-handed alpha
Helix 52	AF7	a	510	516	Right-handed alpha
Helix 53	AF8	a	539	563	Right-handed alpha
Helix 54	AF9	a	580	587	Right-handed alpha
Helix 55	AG1	a	595	608	Right-handed alpha
Helix 56	AG2	a	610	632	Right-handed alpha
Helix 57	AG3	a	634	657	Right-handed alpha
Helix 58	AG4	a	669	695	Right-handed alpha
Helix 59	AG5	B	144	150	Right-handed alpha
Helix 60	AG6	B	164	168	Right-handed 310
Helix 61	AG7	B	183	189	Right-handed alpha
Helix 62	AG8	C	10	32	Right-handed alpha
Helix 63	AG9	C	43	72	Right-handed alpha
Helix 64	AH1	C	74	99	Right-handed alpha
Helix 65	AH2	C	115	125	Right-handed alpha
Helix 66	AH3	c	23	31	Right-handed alpha
Helix 67	AH4	c	42	73	Right-handed alpha
Helix 68	AH5	c	74	79	Right-handed 310
Helix 69	AH6	c	80	99	Right-handed alpha
Helix 70	AH7	c	115	125	Right-handed alpha
Helix 71	AH8	D	63	72	Right-handed alpha
Helix 72	AH9	U	127	134	Right-handed alpha
Helix 73	AI1	U	156	173	Right-handed alpha
Helix 74	AI2	U	175	185	Right-handed alpha
Helix 75	AI3	U	188	196	Right-handed alpha
Helix 76	AI4	U	233	238	Right-handed alpha
Helix 77	AI5	U	281	283	Right-handed 310
Helix 78	AI6	U	291	303	Right-handed alpha
Helix 79	AI7	U	343	354	Right-handed alpha
Helix 80	AI8	V	127	134	Right-handed alpha
Helix 81	AI9	V	156	173	Right-handed alpha
Helix 82	AJ1	V	175	185	Right-handed alpha
Helix 83	AJ2	V	187	196	Right-handed alpha
Helix 84	AJ3	V	233	238	Right-handed alpha
Helix 85	AJ4	V	238	243	Right-handed alpha
Helix 86	AJ5	V	291	303	Right-handed alpha
Helix 87	AJ6	V	343	354	Right-handed alpha
Helix 88	AJ7	W	127	133	Right-handed alpha
Helix 89	AJ8	W	156	172	Right-handed alpha
Helix 90	AJ9	W	175	185	Right-handed alpha
Helix 91	AK1	W	188	197	Right-handed alpha
Helix 92	AK2	W	233	238	Right-handed alpha
Helix 93	AK3	W	291	303	Right-handed alpha
Helix 94	AK4	W	341	354	Right-handed alpha

There are 12 sheets in PDB entry 7UEA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	101	first strand
Strand 2	A	105	106	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	134	135	first strand
Strand 2	B	196	199	anti-parallel
Strand 3	B	205	206	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	160	first strand
Strand 2	B	171	174	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	53	first strand
Strand 2	D	32	36	anti-parallel
Strand 3	D	75	79	parallel
Strand 4	D	110	111	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	198	200	first strand
Strand 2	U	218	229	anti-parallel
Strand 3	U	209	211	anti-parallel

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There are 15 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	204	205	first strand
Strand 2	U	218	229	anti-parallel
Strand 3	U	142	153	anti-parallel
Strand 4	U	109	123	anti-parallel
Strand 5	U	95	106	anti-parallel
Strand 6	U	78	89	anti-parallel
Strand 7	U	65	75	anti-parallel
Strand 8	U	47	56	anti-parallel
Strand 9	U	255	261	anti-parallel
Strand 10	U	264	273	anti-parallel
Strand 11	U	28	36	anti-parallel
Strand 12	U	10	20	anti-parallel
Strand 13	U	307	316	parallel
Strand 14	U	337	341	anti-parallel
Strand 15	U	332	333	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	277	279	first strand
Strand 2	U	285	287	anti-parallel
Strand 3	U	363	365	anti-parallel
Strand 4	U	322	324	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	198	200	first strand
Strand 2	V	216	231	anti-parallel
Strand 3	V	204	213	anti-parallel

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There are 15 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	198	200	first strand
Strand 2	V	216	231	anti-parallel
Strand 3	V	140	153	anti-parallel
Strand 4	V	109	123	anti-parallel
Strand 5	V	95	106	anti-parallel
Strand 6	V	78	90	anti-parallel
Strand 7	V	64	75	anti-parallel
Strand 8	V	47	59	anti-parallel
Strand 9	V	252	261	anti-parallel
Strand 10	V	264	273	anti-parallel
Strand 11	V	28	36	anti-parallel
Strand 12	V	11	19	anti-parallel
Strand 13	V	308	316	parallel
Strand 14	V	337	341	anti-parallel
Strand 15	V	332	333	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	277	279	first strand
Strand 2	V	285	287	anti-parallel
Strand 3	V	363	365	anti-parallel
Strand 4	V	322	325	anti-parallel

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There are 15 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	204	211	first strand
Strand 2	W	218	227	anti-parallel
Strand 3	W	142	153	anti-parallel
Strand 4	W	109	123	anti-parallel
Strand 5	W	95	106	anti-parallel
Strand 6	W	78	90	anti-parallel
Strand 7	W	64	75	anti-parallel
Strand 8	W	47	59	anti-parallel
Strand 9	W	252	261	anti-parallel
Strand 10	W	264	274	anti-parallel
Strand 11	W	27	36	anti-parallel
Strand 12	W	11	20	anti-parallel
Strand 13	W	308	316	parallel
Strand 14	W	337	340	anti-parallel
Strand 15	W	332	334	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	277	281	first strand
Strand 2	W	284	287	anti-parallel
Strand 3	W	362	365	anti-parallel
Strand 4	W	322	326	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UEA

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UEA