Analysis of interatomic Contacts of Structural Units in PDB entry:
7UFL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UFL entry

There are 3 chains in PDB entry 7UFL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 20ALA 614
B
 THR 21TYR 613
E
 ASN 334SER 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 7UFL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 52Right-handed alpha
Helix 2
AA2
A
55 83Right-handed alpha
Helix 3
AA3
A
90 101Right-handed alpha
Helix 4
AA4
A
109 129Right-handed alpha
Helix 5
AA5
A
146 155Right-handed alpha
Helix 6
AA6
A
157 171Right-handed alpha
Helix 7
AA7
A
175 194Right-handed alpha
Helix 8
AA8
A
198 205Right-handed alpha
Helix 9
AA9
A
206 208Right-handed 310
Helix 10
AB1
A
218 232Right-handed alpha
Helix 11
AB2
A
233 252Right-handed alpha
Helix 12
AB3
A
265 267Right-handed 310
Helix 13
AB4
A
275 277Right-handed 310
Helix 14
AB5
A
278 283Right-handed alpha
Helix 15
AB6
A
293 300Right-handed alpha
Helix 16
AB7
A
303 317Right-handed alpha
Helix 17
AB8
A
324 331Right-handed alpha
Helix 18
AB9
A
365 385Right-handed alpha
Helix 19
AC1
A
386 388Right-handed 310
Helix 20
AC2
A
389 393Right-handed 310
Helix 21
AC3
A
399 413Right-handed alpha
Helix 22
AC4
A
414 421Right-handed alpha
Helix 23
AC5
A
432 446Right-handed alpha
Helix 24
AC6
A
449 466Right-handed alpha
Helix 25
AC7
A
469 471Right-handed 310
Helix 26
AC8
A
472 484Right-handed alpha
Helix 27
AC9
A
499 502Right-handed 310
Helix 28
AD1
A
503 508Right-handed alpha
Helix 29
AD2
A
513 533Right-handed alpha
Helix 30
AD3
A
538 542Right-handed 310
Helix 31
AD4
A
547 559Right-handed alpha
Helix 32
AD5
A
565 575Right-handed alpha
Helix 33
AD6
A
581 588Right-handed alpha
Helix 34
AD7
A
588 599Right-handed alpha
Helix 35
AD8
B
22 53Right-handed alpha
Helix 36
AD9
B
55 81Right-handed alpha
Helix 37
AE1
B
90 101Right-handed alpha
Helix 38
AE2
B
109 129Right-handed alpha
Helix 39
AE3
B
147 155Right-handed alpha
Helix 40
AE4
B
157 172Right-handed alpha
Helix 41
AE5
B
175 193Right-handed alpha
Helix 42
AE6
B
198 205Right-handed alpha
Helix 43
AE7
B
218 232Right-handed alpha
Helix 44
AE8
B
233 252Right-handed alpha
Helix 45
AE9
B
265 267Right-handed 310
Helix 46
AF1
B
275 277Right-handed 310
Helix 47
AF2
B
278 283Right-handed alpha
Helix 48
AF3
B
293 300Right-handed alpha
Helix 49
AF4
B
303 317Right-handed alpha
Helix 50
AF5
B
324 331Right-handed alpha
Helix 51
AF6
B
365 385Right-handed alpha
Helix 52
AF7
B
386 388Right-handed 310
Helix 53
AF8
B
389 393Right-handed 310
Helix 54
AF9
B
397 413Right-handed alpha
Helix 55
AG1
B
414 421Right-handed alpha
Helix 56
AG2
B
431 446Right-handed alpha
Helix 57
AG3
B
448 466Right-handed alpha
Helix 58
AG4
B
469 471Right-handed 310
Helix 59
AG5
B
472 484Right-handed alpha
Helix 60
AG6
B
499 502Right-handed 310
Helix 61
AG7
B
503 508Right-handed alpha
Helix 62
AG8
B
513 533Right-handed alpha
Helix 63
AG9
B
538 542Right-handed 310
Helix 64
AH1
B
547 559Right-handed alpha
Helix 65
AH2
B
565 575Right-handed alpha
Helix 66
AH3
B
581 588Right-handed alpha
Helix 67
AH4
B
588 599Right-handed alpha
Helix 68
AH5
E
338 343Right-handed alpha
Helix 69
AH6
E
365 370Right-handed alpha
Helix 70
AH7
E
406 410Right-handed 310
Helix 71
AH8
E
416 422Right-handed alpha
Helix 72
AH9
E
438 443Right-handed alpha
Helix 73
AI1
E
502 506Right-handed 310
Helix 74
AI2
F
406 410Right-handed 310
Helix 75
AI3
F
416 422Right-handed alpha
Helix 76
AI4
F
438 443Right-handed alpha
Helix 77
AI5
F
502 506Right-handed 310
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There are 14 sheets in PDB entry 7UFL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
141 142anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
487 488parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 352first strand
Strand 2
A
355 359anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 133first strand
Strand 2
B
141 143anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 263first strand
Strand 2
B
487 488parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 352first strand
Strand 2
B
355 359anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
354 358first strand
Strand 2
E
392 402anti-parallel
Strand 3
E
524 525anti-parallel
Strand 4
E
361 362parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
354 358first strand
Strand 2
E
392 402anti-parallel
Strand 3
E
508 517anti-parallel
Strand 4
E
431 437anti-parallel
Strand 5
E
378 380anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
452 454first strand
Strand 2
E
492 494anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
473 474first strand
Strand 2
E
488 489anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
354 358first strand
Strand 2
F
392 402anti-parallel
Strand 3
F
524 525anti-parallel
Strand 4
F
361 362parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
354 358first strand
Strand 2
F
392 402anti-parallel
Strand 3
F
508 516anti-parallel
Strand 4
F
431 437anti-parallel
Strand 5
F
376 380anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
452 454first strand
Strand 2
F
492 494anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
473 474first strand
Strand 2
F
488 489anti-parallel
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