Analysis of interatomic Contacts of Structural Units in PDB entry:
7UFP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UFP entry

There is 1 chain in PDB entry 7UFP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
I
 ALA -7CYS 475
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7UFP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
I
3 10Right-handed alpha
Helix 2
AA2
I
28 32Right-handed 310
Helix 3
AA3
I
44 54Right-handed alpha
Helix 4
AA4
I
67 76Right-handed alpha
Helix 5
AA5
I
84 101Right-handed alpha
Helix 6
AA6
I
114 129Right-handed alpha
Helix 7
AA7
I
151 160Right-handed alpha
Helix 8
AA8
I
184 194Right-handed alpha
Helix 9
AA9
I
206 212Right-handed alpha
Helix 10
AB1
I
213 227Right-handed alpha
Helix 11
AB2
I
239 245Right-handed alpha
Helix 12
AB3
I
246 249Right-handed 310
Helix 13
AB4
I
280 284Right-handed 310
Helix 14
AB5
I
288 305Right-handed alpha
Helix 15
AB6
I
308 318Right-handed alpha
Helix 16
AB7
I
342 356Right-handed alpha
Helix 17
AB8
I
372 389Right-handed alpha
Helix 18
AB9
I
405 409Right-handed 310
Helix 19
AC1
I
411 425Right-handed alpha
Helix 20
AC2
I
434 446Right-handed alpha
Helix 21
AC3
I
462 470Right-handed alpha
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There are 5 sheets in PDB entry 7UFP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
0 2first strand
Strand 2
I
20 22anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
12 15first strand
Strand 2
I
79 82anti-parallel
Strand 3
I
58 64parallel
Strand 4
I
37 43parallel
Strand 5
I
26 27parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
133 135first strand
Strand 2
I
166 170parallel
Strand 3
I
105 110parallel
Strand 4
I
197 200parallel
Strand 5
I
232 236parallel
Strand 6
I
254 258parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
264 267first strand
Strand 2
I
270 273anti-parallel
Strand 3
I
276 279anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
327 330first strand
Strand 2
I
334 338anti-parallel
Strand 3
I
451 455parallel
Strand 4
I
361 366parallel
Strand 5
I
393 398parallel
Strand 6
I
429 432parallel
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