Analysis of interatomic Contacts of Structural Units in PDB entry:
7UFR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UFR entry

There are 4 chains in PDB entry 7UFR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 2	ARG 1039
B	PHE 2	ARG 1039
C	PHE 2	ARG 1039
D	PHE 2	ARG 1039

There are 89 helices in PDB entry 7UFR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	20	Right-handed alpha
Helix 2	AA2	A	21	24	Right-handed 310
Helix 3	AA3	A	44	55	Right-handed alpha
Helix 4	AA4	A	197	215	Right-handed alpha
Helix 5	AA5	A	221	238	Right-handed alpha
Helix 6	AA6	A	244	258	Right-handed alpha
Helix 7	AA7	A	283	305	Right-handed alpha
Helix 8	AA8	A	314	325	Right-handed alpha
Helix 9	AA9	A	325	338	Right-handed alpha
Helix 10	AB1	A	357	376	Right-handed alpha
Helix 11	AB2	A	394	401	Right-handed alpha
Helix 12	AB3	A	410	415	Right-handed 310
Helix 13	AB4	A	450	461	Right-handed alpha
Helix 14	AB5	A	484	494	Right-handed alpha
Helix 15	AB6	A	507	524	Right-handed alpha
Helix 16	AB7	A	539	544	Right-handed 310
Helix 17	AB8	A	546	572	Right-handed alpha
Helix 18	AB9	A	580	595	Right-handed alpha
Helix 19	AC1	A	605	638	Right-handed alpha
Helix 20	AC2	A	738	742	Right-handed 310
Helix 21	AC3	A	833	839	Right-handed alpha
Helix 22	AC4	A	917	930	Right-handed alpha
Helix 23	AC5	A	987	990	Right-handed 310
Helix 24	AC6	B	4	20	Right-handed alpha
Helix 25	AC7	B	21	24	Right-handed 310
Helix 26	AC8	B	44	55	Right-handed alpha
Helix 27	AC9	B	197	215	Right-handed alpha
Helix 28	AD1	B	221	238	Right-handed alpha
Helix 29	AD2	B	244	258	Right-handed alpha
Helix 30	AD3	B	283	305	Right-handed alpha
Helix 31	AD4	B	314	325	Right-handed alpha
Helix 32	AD5	B	325	338	Right-handed alpha
Helix 33	AD6	B	357	376	Right-handed alpha
Helix 34	AD7	B	394	401	Right-handed alpha
Helix 35	AD8	B	410	415	Right-handed 310
Helix 36	AD9	B	450	461	Right-handed alpha
Helix 37	AE1	B	484	494	Right-handed alpha
Helix 38	AE2	B	507	524	Right-handed alpha
Helix 39	AE3	B	539	544	Right-handed 310
Helix 40	AE4	B	546	572	Right-handed alpha
Helix 41	AE5	B	580	595	Right-handed alpha
Helix 42	AE6	B	605	638	Right-handed alpha
Helix 43	AE7	B	833	839	Right-handed alpha
Helix 44	AE8	B	917	930	Right-handed alpha
Helix 45	AE9	B	987	990	Right-handed 310
Helix 46	AF1	C	4	20	Right-handed alpha
Helix 47	AF2	C	21	24	Right-handed 310
Helix 48	AF3	C	44	55	Right-handed alpha
Helix 49	AF4	C	197	215	Right-handed alpha
Helix 50	AF5	C	221	238	Right-handed alpha
Helix 51	AF6	C	244	258	Right-handed alpha
Helix 52	AF7	C	283	305	Right-handed alpha
Helix 53	AF8	C	314	325	Right-handed alpha
Helix 54	AF9	C	325	338	Right-handed alpha
Helix 55	AG1	C	357	376	Right-handed alpha
Helix 56	AG2	C	394	401	Right-handed alpha
Helix 57	AG3	C	410	415	Right-handed 310
Helix 58	AG4	C	450	461	Right-handed alpha
Helix 59	AG5	C	484	494	Right-handed alpha
Helix 60	AG6	C	507	524	Right-handed alpha
Helix 61	AG7	C	539	544	Right-handed 310
Helix 62	AG8	C	546	572	Right-handed alpha
Helix 63	AG9	C	580	595	Right-handed alpha
Helix 64	AH1	C	605	638	Right-handed alpha
Helix 65	AH2	C	833	839	Right-handed alpha
Helix 66	AH3	C	917	930	Right-handed alpha
Helix 67	AH4	C	987	990	Right-handed 310
Helix 68	AH5	D	4	20	Right-handed alpha
Helix 69	AH6	D	21	24	Right-handed 310
Helix 70	AH7	D	44	55	Right-handed alpha
Helix 71	AH8	D	197	215	Right-handed alpha
Helix 72	AH9	D	221	238	Right-handed alpha
Helix 73	AI1	D	244	258	Right-handed alpha
Helix 74	AI2	D	283	305	Right-handed alpha
Helix 75	AI3	D	314	325	Right-handed alpha
Helix 76	AI4	D	325	338	Right-handed alpha
Helix 77	AI5	D	357	376	Right-handed alpha
Helix 78	AI6	D	394	403	Right-handed alpha
Helix 79	AI7	D	410	415	Right-handed 310
Helix 80	AI8	D	450	461	Right-handed alpha
Helix 81	AI9	D	484	494	Right-handed alpha
Helix 82	AJ1	D	507	524	Right-handed alpha
Helix 83	AJ2	D	539	544	Right-handed 310
Helix 84	AJ3	D	546	572	Right-handed alpha
Helix 85	AJ4	D	580	595	Right-handed alpha
Helix 86	AJ5	D	605	638	Right-handed alpha
Helix 87	AJ6	D	833	839	Right-handed alpha
Helix 88	AJ7	D	917	930	Right-handed alpha
Helix 89	AJ8	D	987	990	Right-handed 310

There are 44 sheets in PDB entry 7UFR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	30	first strand
Strand 2	A	190	194	anti-parallel
Strand 3	A	95	98	anti-parallel
Strand 4	A	131	132	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	62	first strand
Strand 2	A	32	38	anti-parallel
Strand 3	A	74	82	anti-parallel
Strand 4	A	150	158	anti-parallel
Strand 5	A	111	116	anti-parallel
Strand 6	A	120	121	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	469	474	first strand
Strand 2	A	267	272	parallel
Strand 3	A	502	505	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	310	312	first strand
Strand 2	A	341	343	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	382	384	first strand
Strand 2	A	406	408	parallel
Strand 3	A	434	438	parallel
Strand 4	A	424	428	anti-parallel
Strand 5	A	529	531	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	661	663	first strand
Strand 2	A	646	649	anti-parallel
Strand 3	A	933	934	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	683	686	first strand
Strand 2	A	690	694	anti-parallel
Strand 3	A	700	705	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	746	748	first strand
Strand 2	A	721	726	anti-parallel
Strand 3	A	801	808	anti-parallel
Strand 4	A	883	892	anti-parallel
Strand 5	A	866	872	anti-parallel
Strand 6	A	842	843	anti-parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	750	757	first strand
Strand 2	A	762	769	anti-parallel
Strand 3	A	774	781	anti-parallel
Strand 4	A	787	796	anti-parallel
Strand 5	A	904	913	anti-parallel
Strand 6	A	856	861	anti-parallel
Strand 7	A	847	851	anti-parallel
Strand 8	A	815	819	anti-parallel
Strand 9	A	824	828	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	943	949	first strand
Strand 2	A	979	985	anti-parallel
Strand 3	A	1023	1027	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	952	959	first strand
Strand 2	A	967	973	anti-parallel
Strand 3	A	1033	1038	anti-parallel
Strand 4	A	993	996	anti-parallel
Strand 5	A	1018	1019	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	30	first strand
Strand 2	B	190	194	anti-parallel
Strand 3	B	95	98	anti-parallel
Strand 4	B	131	132	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	62	first strand
Strand 2	B	32	38	anti-parallel
Strand 3	B	74	82	anti-parallel
Strand 4	B	150	158	anti-parallel
Strand 5	B	111	116	anti-parallel
Strand 6	B	120	121	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	469	474	first strand
Strand 2	B	267	272	parallel
Strand 3	B	502	505	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	310	312	first strand
Strand 2	B	341	343	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	382	384	first strand
Strand 2	B	406	408	parallel
Strand 3	B	434	438	parallel
Strand 4	B	424	428	anti-parallel
Strand 5	B	529	531	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	661	663	first strand
Strand 2	B	646	649	anti-parallel
Strand 3	B	933	934	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	683	686	first strand
Strand 2	B	690	694	anti-parallel
Strand 3	B	700	705	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	746	748	first strand
Strand 2	B	721	726	anti-parallel
Strand 3	B	801	808	anti-parallel
Strand 4	B	883	892	anti-parallel
Strand 5	B	866	872	anti-parallel
Strand 6	B	842	843	anti-parallel

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There are 9 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	750	757	first strand
Strand 2	B	762	769	anti-parallel
Strand 3	B	774	781	anti-parallel
Strand 4	B	787	796	anti-parallel
Strand 5	B	904	913	anti-parallel
Strand 6	B	856	861	anti-parallel
Strand 7	B	847	851	anti-parallel
Strand 8	B	815	819	anti-parallel
Strand 9	B	824	828	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	943	949	first strand
Strand 2	B	979	985	anti-parallel
Strand 3	B	1023	1027	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	952	959	first strand
Strand 2	B	967	973	anti-parallel
Strand 3	B	1033	1038	anti-parallel
Strand 4	B	993	996	anti-parallel
Strand 5	B	1018	1019	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	190	194	anti-parallel
Strand 3	C	95	98	anti-parallel
Strand 4	C	131	132	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	62	first strand
Strand 2	C	32	38	anti-parallel
Strand 3	C	74	82	anti-parallel
Strand 4	C	150	158	anti-parallel
Strand 5	C	111	116	anti-parallel
Strand 6	C	120	121	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	469	474	first strand
Strand 2	C	267	272	parallel
Strand 3	C	502	505	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	310	312	first strand
Strand 2	C	341	343	parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	382	384	first strand
Strand 2	C	406	408	parallel
Strand 3	C	434	438	parallel
Strand 4	C	424	428	anti-parallel
Strand 5	C	529	531	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	661	663	first strand
Strand 2	C	647	649	anti-parallel
Strand 3	C	932	933	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	683	686	first strand
Strand 2	C	690	694	anti-parallel
Strand 3	C	700	705	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	746	748	first strand
Strand 2	C	721	726	anti-parallel
Strand 3	C	801	808	anti-parallel
Strand 4	C	883	892	anti-parallel
Strand 5	C	866	872	anti-parallel
Strand 6	C	842	843	anti-parallel

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There are 9 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	750	757	first strand
Strand 2	C	762	769	anti-parallel
Strand 3	C	774	781	anti-parallel
Strand 4	C	787	796	anti-parallel
Strand 5	C	904	913	anti-parallel
Strand 6	C	856	861	anti-parallel
Strand 7	C	847	851	anti-parallel
Strand 8	C	815	819	anti-parallel
Strand 9	C	824	828	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	943	949	first strand
Strand 2	C	979	985	anti-parallel
Strand 3	C	1023	1027	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	952	959	first strand
Strand 2	C	967	973	anti-parallel
Strand 3	C	1033	1038	anti-parallel
Strand 4	C	993	996	anti-parallel
Strand 5	C	1018	1019	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	27	30	first strand
Strand 2	D	190	194	anti-parallel
Strand 3	D	95	98	anti-parallel
Strand 4	D	131	132	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	60	62	first strand
Strand 2	D	32	38	anti-parallel
Strand 3	D	74	82	anti-parallel
Strand 4	D	150	158	anti-parallel
Strand 5	D	111	116	anti-parallel
Strand 6	D	120	121	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	469	474	first strand
Strand 2	D	267	272	parallel
Strand 3	D	502	505	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	310	312	first strand
Strand 2	D	341	343	parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	382	384	first strand
Strand 2	D	406	408	parallel
Strand 3	D	434	438	parallel
Strand 4	D	424	428	anti-parallel
Strand 5	D	529	531	parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	661	663	first strand
Strand 2	D	646	649	anti-parallel
Strand 3	D	933	934	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	683	686	first strand
Strand 2	D	690	694	anti-parallel
Strand 3	D	700	705	anti-parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	746	748	first strand
Strand 2	D	721	726	anti-parallel
Strand 3	D	801	808	anti-parallel
Strand 4	D	883	892	anti-parallel
Strand 5	D	866	872	anti-parallel
Strand 6	D	842	843	anti-parallel

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There are 9 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	750	757	first strand
Strand 2	D	762	769	anti-parallel
Strand 3	D	774	781	anti-parallel
Strand 4	D	787	796	anti-parallel
Strand 5	D	904	913	anti-parallel
Strand 6	D	856	861	anti-parallel
Strand 7	D	847	851	anti-parallel
Strand 8	D	815	819	anti-parallel
Strand 9	D	824	828	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	943	949	first strand
Strand 2	D	979	985	anti-parallel
Strand 3	D	1023	1027	anti-parallel

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There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	952	959	first strand
Strand 2	D	967	973	anti-parallel
Strand 3	D	1033	1038	anti-parallel
Strand 4	D	993	996	anti-parallel
Strand 5	D	1018	1019	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UFR

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UFR