Analysis of interatomic Contacts of Structural Units in PDB entry:
7UG3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UG3 entry

There are 4 chains in PDB entry 7UG3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLU 429
B	MET 1	GLU 429
C	MET 1	SER 428
D	MET 1	GLU 132

There are 64 helices in PDB entry 7UG3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	13	Right-handed alpha
Helix 2	AA2	A	61	73	Right-handed alpha
Helix 3	AA3	A	85	99	Right-handed alpha
Helix 4	AA4	A	111	130	Right-handed alpha
Helix 5	AA5	A	187	190	Right-handed 310
Helix 6	AA6	A	191	201	Right-handed alpha
Helix 7	AA7	A	224	239	Right-handed alpha
Helix 8	AA8	A	258	263	Right-handed 310
Helix 9	AA9	A	273	278	Right-handed 310
Helix 10	AB1	A	289	297	Right-handed alpha
Helix 11	AB2	A	313	329	Right-handed alpha
Helix 12	AB3	A	331	348	Right-handed alpha
Helix 13	AB4	A	349	353	Right-handed 310
Helix 14	AB5	A	375	386	Right-handed alpha
Helix 15	AB6	A	406	421	Right-handed alpha
Helix 16	AB7	A	422	427	Right-handed 310
Helix 17	AB8	B	2	13	Right-handed alpha
Helix 18	AB9	B	61	75	Right-handed alpha
Helix 19	AC1	B	85	99	Right-handed alpha
Helix 20	AC2	B	111	130	Right-handed alpha
Helix 21	AC3	B	187	190	Right-handed 310
Helix 22	AC4	B	191	202	Right-handed alpha
Helix 23	AC5	B	224	239	Right-handed alpha
Helix 24	AC6	B	258	263	Right-handed 310
Helix 25	AC7	B	273	278	Right-handed 310
Helix 26	AC8	B	289	296	Right-handed alpha
Helix 27	AC9	B	313	329	Right-handed alpha
Helix 28	AD1	B	331	348	Right-handed alpha
Helix 29	AD2	B	349	353	Right-handed 310
Helix 30	AD3	B	375	386	Right-handed alpha
Helix 31	AD4	B	406	421	Right-handed alpha
Helix 32	AD5	B	422	427	Right-handed 310
Helix 33	AD6	C	2	13	Right-handed alpha
Helix 34	AD7	C	61	75	Right-handed alpha
Helix 35	AD8	C	85	99	Right-handed alpha
Helix 36	AD9	C	111	131	Right-handed alpha
Helix 37	AE1	C	187	190	Right-handed 310
Helix 38	AE2	C	191	202	Right-handed alpha
Helix 39	AE3	C	224	239	Right-handed alpha
Helix 40	AE4	C	258	264	Right-handed 310
Helix 41	AE5	C	273	278	Right-handed 310
Helix 42	AE6	C	290	299	Right-handed alpha
Helix 43	AE7	C	313	329	Right-handed alpha
Helix 44	AE8	C	331	348	Right-handed alpha
Helix 45	AE9	C	349	353	Right-handed 310
Helix 46	AF1	C	375	386	Right-handed alpha
Helix 47	AF2	C	406	422	Right-handed alpha
Helix 48	AF3	C	423	427	Right-handed 310
Helix 49	AF4	D	2	13	Right-handed alpha
Helix 50	AF5	D	61	75	Right-handed alpha
Helix 51	AF6	D	85	99	Right-handed alpha
Helix 52	AF7	D	111	131	Right-handed alpha
Helix 53	AF8	D	187	190	Right-handed 310
Helix 54	AF9	D	191	201	Right-handed alpha
Helix 55	AG1	D	225	239	Right-handed alpha
Helix 56	AG2	D	258	263	Right-handed 310
Helix 57	AG3	D	273	278	Right-handed 310
Helix 58	AG4	D	290	297	Right-handed alpha
Helix 59	AG5	D	313	329	Right-handed alpha
Helix 60	AG6	D	331	348	Right-handed alpha
Helix 61	AG7	D	349	353	Right-handed 310
Helix 62	AG8	D	375	386	Right-handed alpha
Helix 63	AG9	D	406	421	Right-handed alpha
Helix 64	AH1	D	422	427	Right-handed 310

There are 12 sheets in PDB entry 7UG3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	388	389	first strand
Strand 2	A	44	47	parallel
Strand 3	A	36	39	anti-parallel
Strand 4	A	27	33	anti-parallel
Strand 5	B	83	84	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	84	first strand
Strand 2	B	27	33	parallel
Strand 3	B	36	39	anti-parallel
Strand 4	B	44	47	anti-parallel
Strand 5	B	388	389	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	109	first strand
Strand 2	A	284	288	anti-parallel
Strand 3	A	269	272	anti-parallel
Strand 4	A	241	245	parallel
Strand 5	A	205	210	parallel
Strand 6	A	136	141	parallel
Strand 7	A	173	176	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	362	first strand
Strand 2	A	365	370	anti-parallel
Strand 3	A	396	399	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	109	first strand
Strand 2	B	284	288	anti-parallel
Strand 3	B	269	272	anti-parallel
Strand 4	B	241	245	parallel
Strand 5	B	205	210	parallel
Strand 6	B	136	141	parallel
Strand 7	B	173	176	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	356	361	first strand
Strand 2	B	366	370	anti-parallel
Strand 3	B	396	399	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	388	389	first strand
Strand 2	C	44	47	parallel
Strand 3	C	36	39	anti-parallel
Strand 4	C	27	33	anti-parallel
Strand 5	D	83	84	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	84	first strand
Strand 2	D	27	33	parallel
Strand 3	D	36	39	anti-parallel
Strand 4	D	44	47	anti-parallel
Strand 5	D	388	389	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	103	109	first strand
Strand 2	C	284	289	anti-parallel
Strand 3	C	269	272	anti-parallel
Strand 4	C	241	245	parallel
Strand 5	C	205	210	parallel
Strand 6	C	136	140	parallel
Strand 7	C	173	175	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	356	362	first strand
Strand 2	C	365	370	anti-parallel
Strand 3	C	396	399	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	103	109	first strand
Strand 2	D	284	289	anti-parallel
Strand 3	D	269	272	anti-parallel
Strand 4	D	241	245	parallel
Strand 5	D	205	210	parallel
Strand 6	D	136	139	parallel
Strand 7	D	173	174	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	356	362	first strand
Strand 2	D	365	370	anti-parallel
Strand 3	D	396	399	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UG3

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UG3