Analysis of interatomic Contacts of Structural Units in PDB entry:
7UG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UG8 entry

There are 2 chains in PDB entry 7UG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 7ASP 335
B
 GLY 7GLU 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7UG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 41Right-handed alpha
Helix 2
AA2
A
57 59Right-handed 310
Helix 3
AA3
A
60 67Right-handed alpha
Helix 4
AA4
A
76 81Right-handed 310
Helix 5
AA5
A
84 91Right-handed 310
Helix 6
AA6
A
98 109Right-handed alpha
Helix 7
AA7
A
110 121Right-handed alpha
Helix 8
AA8
A
146 151Right-handed 310
Helix 9
AA9
A
158 168Right-handed alpha
Helix 10
AB1
A
176 178Right-handed 310
Helix 11
AB2
A
179 186Right-handed alpha
Helix 12
AB3
A
196 204Right-handed alpha
Helix 13
AB4
A
204 209Right-handed alpha
Helix 14
AB5
A
230 235Right-handed alpha
Helix 15
AB6
A
237 273Right-handed alpha
Helix 16
AB7
A
281 302Right-handed alpha
Helix 17
AB8
A
303 328Right-handed alpha
Helix 18
AB9
A
328 334Right-handed alpha
Helix 19
AC1
B
23 41Right-handed alpha
Helix 20
AC2
B
57 59Right-handed 310
Helix 21
AC3
B
60 67Right-handed alpha
Helix 22
AC4
B
76 81Right-handed 310
Helix 23
AC5
B
84 91Right-handed 310
Helix 24
AC6
B
98 109Right-handed alpha
Helix 25
AC7
B
110 121Right-handed alpha
Helix 26
AC8
B
146 151Right-handed 310
Helix 27
AC9
B
158 168Right-handed alpha
Helix 28
AD1
B
176 178Right-handed 310
Helix 29
AD2
B
179 186Right-handed alpha
Helix 30
AD3
B
196 203Right-handed alpha
Helix 31
AD4
B
204 209Right-handed alpha
Helix 32
AD5
B
230 236Right-handed alpha
Helix 33
AD6
B
237 273Right-handed alpha
Helix 34
AD7
B
281 302Right-handed alpha
Helix 35
AD8
B
303 328Right-handed alpha
Helix 36
AD9
B
328 334Right-handed alpha
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There are 4 sheets in PDB entry 7UG8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 50first strand
Strand 2
A
11 17parallel
Strand 3
A
72 75parallel
Strand 4
A
223 229anti-parallel
Strand 5
A
124 131anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 173first strand
Strand 2
A
154 156parallel
Strand 3
A
191 192parallel
Strand 4
A
139 140anti-parallel
Strand 5
A
211 214anti-parallel
Strand 6
A
276 279parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 50first strand
Strand 2
B
11 17parallel
Strand 3
B
72 75parallel
Strand 4
B
223 229anti-parallel
Strand 5
B
124 131anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 173first strand
Strand 2
B
154 156parallel
Strand 3
B
191 192parallel
Strand 4
B
139 140anti-parallel
Strand 5
B
211 214anti-parallel
Strand 6
B
276 279parallel
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