Analysis of interatomic Contacts of Structural Units in PDB entry:
7UGD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UGD entry

There are 2 chains in PDB entry 7UGD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 3ALA 384
A
 ILE 386GLU 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 22 helices in PDB entry 7UGD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 10Right-handed alpha
Helix 2
AA2
A
11 33Right-handed alpha
Helix 3
AA3
A
35 43Right-handed alpha
Helix 4
AA4
A
43 57Right-handed alpha
Helix 5
AA5
A
57 74Right-handed alpha
Helix 6
AA6
A
80 108Right-handed alpha
Helix 7
AA7
A
129 136Right-handed alpha
Helix 8
AA8
A
141 149Right-handed alpha
Helix 9
AA9
A
151 170Right-handed alpha
Helix 10
AB1
A
173 218Right-handed alpha
Helix 11
AB2
A
222 246Right-handed alpha
Helix 12
AB3
A
246 255Right-handed alpha
Helix 13
AB4
A
257 265Right-handed alpha
Helix 14
AB5
A
265 276Right-handed alpha
Helix 15
AB6
A
281 293Right-handed alpha
Helix 16
AB7
A
295 300Right-handed alpha
Helix 17
AB8
A
301 310Right-handed alpha
Helix 18
AB9
A
311 330Right-handed alpha
Helix 19
AC1
A
334 352Right-handed alpha
Helix 20
AC2
A
362 370Right-handed alpha
Helix 21
AC3
A
376 389Right-handed alpha
Helix 22
AC4
A
389 416Right-handed alpha
Back to top of page
There are no sheets in PDB entry 7UGD
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il