Analysis of interatomic Contacts of Structural Units in PDB entry:
7UGH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UGH entry

There are 2 chains in PDB entry 7UGH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 77ALA 555
B
 VAL 79ALA 512
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 7UGH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
138 142Right-handed 310
Helix 2
AA2
A
144 154Right-handed alpha
Helix 3
AA3
A
154 160Right-handed alpha
Helix 4
AA4
A
166 179Right-handed alpha
Helix 5
AA5
A
187 206Right-handed alpha
Helix 6
AA6
A
209 220Right-handed alpha
Helix 7
AA7
A
220 225Right-handed alpha
Helix 8
AA8
A
242 245Right-handed 310
Helix 9
AA9
A
263 287Right-handed alpha
Helix 10
AB1
A
288 292Right-handed 310
Helix 11
AB2
A
305 320Right-handed alpha
Helix 12
AB3
A
335 338Right-handed 310
Helix 13
AB4
A
357 372Right-handed alpha
Helix 14
AB5
A
386 398Right-handed alpha
Helix 15
AB6
A
412 423Right-handed alpha
Helix 16
AB7
A
431 436Right-handed alpha
Helix 17
AB8
A
437 450Right-handed alpha
Helix 18
AB9
A
467 476Right-handed alpha
Helix 19
AC1
A
488 508Right-handed alpha
Helix 20
AC2
B
138 142Right-handed 310
Helix 21
AC3
B
144 154Right-handed alpha
Helix 22
AC4
B
154 160Right-handed alpha
Helix 23
AC5
B
166 179Right-handed alpha
Helix 24
AC6
B
187 206Right-handed alpha
Helix 25
AC7
B
209 220Right-handed alpha
Helix 26
AC8
B
220 225Right-handed alpha
Helix 27
AC9
B
242 245Right-handed 310
Helix 28
AD1
B
263 287Right-handed alpha
Helix 29
AD2
B
288 292Right-handed 310
Helix 30
AD3
B
305 320Right-handed alpha
Helix 31
AD4
B
335 338Right-handed 310
Helix 32
AD5
B
357 372Right-handed alpha
Helix 33
AD6
B
386 398Right-handed alpha
Helix 34
AD7
B
412 423Right-handed alpha
Helix 35
AD8
B
431 436Right-handed alpha
Helix 36
AD9
B
437 451Right-handed alpha
Helix 37
AE1
B
467 477Right-handed alpha
Helix 38
AE2
B
488 508Right-handed alpha
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There are 6 sheets in PDB entry 7UGH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 91first strand
Strand 2
A
97 105anti-parallel
Strand 3
A
113 116anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 234first strand
Strand 2
A
480 482parallel
Strand 3
A
454 458parallel
Strand 4
A
427 430parallel
Strand 5
A
402 405parallel
Strand 6
A
375 379parallel
Strand 7
A
328 333parallel
Strand 8
A
253 258anti-parallel
Strand 9
A
236 240anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
340 341first strand
Strand 2
A
346 350anti-parallel
Strand 3
A
354 356anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 91first strand
Strand 2
B
97 105anti-parallel
Strand 3
B
113 116anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 234first strand
Strand 2
B
480 482parallel
Strand 3
B
454 458parallel
Strand 4
B
427 430parallel
Strand 5
B
402 405parallel
Strand 6
B
375 379parallel
Strand 7
B
328 333parallel
Strand 8
B
253 258anti-parallel
Strand 9
B
236 240anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
340 341first strand
Strand 2
B
346 350anti-parallel
Strand 3
B
354 356anti-parallel
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