Analysis of interatomic Contacts of Structural Units in PDB entry:
7UGO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UGO entry

There are 18 chains in PDB entry 7UGO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 32	VAL 506
B	GLU 32	VAL 506
C	GLU 32	VAL 506
D	VAL 518	ASP 664
E	VAL 518	ASP 664
F	VAL 518	ASP 664
M	GLN 1	ALA 114
N	GLN 1	ALA 114
O	GLN 1	ALA 114
P	VAL 8	GLY 108
Q	VAL 8	GLY 108
R	VAL 8	GLY 108
G	GLN 1	SER 115
H	GLN 1	SER 115
I	GLN 1	SER 115
J	SER 2	SER 106
K	SER 2	SER 106
L	SER 2	SER 106

There are 45 helices in PDB entry 7UGO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	99	115	Right-handed alpha
Helix 2	AA2	A	123	127	Right-handed 310
Helix 3	AA3	A	335	350	Right-handed alpha
Helix 4	AA4	A	351	353	Right-handed 310
Helix 5	AA5	B	99	115	Right-handed alpha
Helix 6	AA6	B	123	127	Right-handed 310
Helix 7	AA7	B	194	198	Right-handed 310
Helix 8	AA8	B	335	350	Right-handed alpha
Helix 9	AA9	B	351	353	Right-handed 310
Helix 10	AB1	C	99	115	Right-handed alpha
Helix 11	AB2	C	123	127	Right-handed 310
Helix 12	AB3	C	194	198	Right-handed 310
Helix 13	AB4	C	335	350	Right-handed alpha
Helix 14	AB5	C	351	353	Right-handed 310
Helix 15	AB6	C	478	482	Right-handed 310
Helix 16	AB7	D	529	534	Right-handed alpha
Helix 17	AB8	D	535	537	Right-handed 310
Helix 18	AB9	D	538	543	Right-handed alpha
Helix 19	AC1	D	569	597	Right-handed alpha
Helix 20	AC2	D	618	623	Right-handed alpha
Helix 21	AC3	D	627	635	Right-handed alpha
Helix 22	AC4	D	638	664	Right-handed alpha
Helix 23	AC5	E	529	534	Right-handed alpha
Helix 24	AC6	E	535	537	Right-handed 310
Helix 25	AC7	E	538	543	Right-handed alpha
Helix 26	AC8	E	569	597	Right-handed alpha
Helix 27	AC9	E	618	623	Right-handed alpha
Helix 28	AD1	E	627	635	Right-handed alpha
Helix 29	AD2	E	638	664	Right-handed alpha
Helix 30	AD3	F	529	534	Right-handed alpha
Helix 31	AD4	F	535	541	Right-handed 310
Helix 32	AD5	F	569	597	Right-handed alpha
Helix 33	AD6	F	618	623	Right-handed alpha
Helix 34	AD7	F	627	635	Right-handed alpha
Helix 35	AD8	F	638	664	Right-handed alpha
Helix 36	AD9	M	83	87	Right-handed 310
Helix 37	AE1	N	83	87	Right-handed 310
Helix 38	AE2	N	100	100	Right-handed 310
Helix 39	AE3	O	83	87	Right-handed 310
Helix 40	AE4	G	61	64	Right-handed 310
Helix 41	AE5	H	61	64	Right-handed 310
Helix 42	AE6	I	61	64	Right-handed 310
Helix 43	AE7	J	25	30	Right-handed alpha
Helix 44	AE8	K	25	30	Right-handed alpha
Helix 45	AE9	L	25	30	Right-handed alpha

There are 52 sheets in PDB entry 7UGO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	496	499	first strand
Strand 2	A	34	38	anti-parallel
Strand 3	D	604	610	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	47	first strand
Strand 2	A	488	491	anti-parallel
Strand 3	A	223	228	anti-parallel
Strand 4	A	242	245	anti-parallel
Strand 5	A	84	85	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	130	132	first strand
Strand 2	A	154	161	anti-parallel
Strand 3	A	170	177	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	182	183	first strand
Strand 2	A	191	192	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	271	273	first strand
Strand 2	A	284	302	anti-parallel
Strand 3	A	330	333	anti-parallel
Strand 4	A	414	421	anti-parallel
Strand 5	A	381	385	anti-parallel
Strand 6	A	374	378	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	271	273	first strand
Strand 2	A	284	302	anti-parallel
Strand 3	A	441	455	anti-parallel
Strand 4	A	467	470	anti-parallel
Strand 5	A	359	361	parallel
Strand 6	A	394	395	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	304	307	first strand
Strand 2	A	317	320	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	496	499	first strand
Strand 2	B	34	39	anti-parallel
Strand 3	E	603	610	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	46	first strand
Strand 2	B	488	491	anti-parallel
Strand 3	B	223	228	anti-parallel
Strand 4	B	242	245	anti-parallel
Strand 5	B	84	85	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	130	132	first strand
Strand 2	B	154	161	anti-parallel
Strand 3	B	170	177	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	182	183	first strand
Strand 2	B	191	192	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	271	273	first strand
Strand 2	B	284	307	anti-parallel
Strand 3	B	330	333	anti-parallel
Strand 4	B	414	421	anti-parallel
Strand 5	B	381	385	anti-parallel
Strand 6	B	374	378	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	317	322	first strand
Strand 2	B	284	307	anti-parallel
Strand 3	B	441	455	anti-parallel
Strand 4	B	467	470	anti-parallel
Strand 5	B	359	361	parallel
Strand 6	B	394	395	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	499	first strand
Strand 2	C	34	38	anti-parallel
Strand 3	F	609	610	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	47	first strand
Strand 2	C	488	491	anti-parallel
Strand 3	C	223	228	anti-parallel
Strand 4	C	242	245	anti-parallel
Strand 5	C	84	85	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	130	133	first strand
Strand 2	C	154	159	anti-parallel
Strand 3	C	172	177	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	182	183	first strand
Strand 2	C	191	192	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	271	273	first strand
Strand 2	C	284	302	anti-parallel
Strand 3	C	441	455	anti-parallel
Strand 4	C	467	470	anti-parallel
Strand 5	C	359	361	parallel
Strand 6	C	394	395	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	271	273	first strand
Strand 2	C	284	302	anti-parallel
Strand 3	C	330	333	anti-parallel
Strand 4	C	414	417	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	304	307	first strand
Strand 2	C	317	320	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	374	378	first strand
Strand 2	C	381	385	anti-parallel
Strand 3	C	419	421	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	3	7	first strand
Strand 2	M	21	25	anti-parallel
Strand 3	M	77	82	anti-parallel
Strand 4	M	67	72	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	11	12	first strand
Strand 2	M	107	111	parallel
Strand 3	M	88	100	anti-parallel
Strand 4	M	33	39	anti-parallel
Strand 5	M	45	51	anti-parallel
Strand 6	M	57	59	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	11	12	first strand
Strand 2	M	107	111	parallel
Strand 3	M	88	100	anti-parallel
Strand 4	M	100	100	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	3	7	first strand
Strand 2	N	21	25	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	58	59	first strand
Strand 2	N	45	51	anti-parallel
Strand 3	N	33	39	anti-parallel
Strand 4	N	88	100	anti-parallel
Strand 5	N	100	100	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	58	59	first strand
Strand 2	N	45	51	anti-parallel
Strand 3	N	33	39	anti-parallel
Strand 4	N	88	100	anti-parallel
Strand 5	N	107	109	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	67	72	first strand
Strand 2	N	77	82	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	3	7	first strand
Strand 2	O	21	25	anti-parallel
Strand 3	O	77	82	anti-parallel
Strand 4	O	67	72	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	11	12	first strand
Strand 2	O	107	111	parallel
Strand 3	O	88	100	anti-parallel
Strand 4	O	33	39	anti-parallel
Strand 5	O	45	51	anti-parallel
Strand 6	O	57	59	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	11	12	first strand
Strand 2	O	107	111	parallel
Strand 3	O	88	100	anti-parallel
Strand 4	O	100	100	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	10	12	first strand
Strand 2	P	101	105	parallel
Strand 3	P	85	92	anti-parallel
Strand 4	P	31	38	anti-parallel
Strand 5	P	45	46	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	20	22	first strand
Strand 2	P	72	74	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	10	12	first strand
Strand 2	Q	101	105	parallel
Strand 3	Q	85	92	anti-parallel
Strand 4	Q	31	38	anti-parallel
Strand 5	Q	45	46	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	19	22	first strand
Strand 2	Q	72	75	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	10	12	first strand
Strand 2	R	102	105	parallel
Strand 3	R	85	92	anti-parallel
Strand 4	R	31	38	anti-parallel
Strand 5	R	45	46	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	19	22	first strand
Strand 2	R	72	75	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	5	first strand
Strand 2	G	18	25	anti-parallel
Strand 3	G	77	82	anti-parallel
Strand 4	G	67	68	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	5	first strand
Strand 2	G	18	25	anti-parallel
Strand 3	G	77	82	anti-parallel
Strand 4	G	71	72	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	57	59	first strand
Strand 2	G	45	51	anti-parallel
Strand 3	G	34	39	anti-parallel
Strand 4	G	88	93	anti-parallel
Strand 5	G	107	109	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	5	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	68	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	5	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	71	72	anti-parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	57	59	first strand
Strand 2	H	45	51	anti-parallel
Strand 3	H	34	39	anti-parallel
Strand 4	H	88	93	anti-parallel
Strand 5	H	107	109	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	3	5	first strand
Strand 2	I	18	25	anti-parallel
Strand 3	I	77	82	anti-parallel
Strand 4	I	67	68	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	3	5	first strand
Strand 2	I	18	25	anti-parallel
Strand 3	I	77	82	anti-parallel
Strand 4	I	71	72	anti-parallel

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There are 5 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	57	59	first strand
Strand 2	I	45	51	anti-parallel
Strand 3	I	34	39	anti-parallel
Strand 4	I	88	93	anti-parallel
Strand 5	I	107	109	anti-parallel

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There are 5 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	9	10	first strand
Strand 2	J	100	102	parallel
Strand 3	J	87	91	anti-parallel
Strand 4	J	36	40	anti-parallel
Strand 5	J	47	50	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	18	21	first strand
Strand 2	J	73	77	anti-parallel
Strand 3	J	64	68	anti-parallel

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There are 5 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	9	10	first strand
Strand 2	K	100	102	parallel
Strand 3	K	87	91	anti-parallel
Strand 4	K	36	40	anti-parallel
Strand 5	K	47	50	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	18	22	first strand
Strand 2	K	73	77	anti-parallel
Strand 3	K	64	68	anti-parallel

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There are 5 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	10	first strand
Strand 2	L	100	102	parallel
Strand 3	L	87	91	anti-parallel
Strand 4	L	36	40	anti-parallel
Strand 5	L	47	50	anti-parallel

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There are 3 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	18	22	first strand
Strand 2	L	73	77	anti-parallel
Strand 3	L	64	68	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UGO

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UGO