Analysis of interatomic Contacts of Structural Units in PDB entry:
7UHF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UHF entry

There are 3 chains in PDB entry 7UHF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 121	LEU 1589
D	PHE 27	GLY 1076
C	GLU 38	HIS 361

There are109 helices in PDB entry 7UHF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	126	145	Right-handed alpha
Helix 2	AA2	A	155	178	Right-handed alpha
Helix 3	AA3	A	197	217	Right-handed alpha
Helix 4	AA4	A	237	247	Right-handed 310
Helix 5	AA5	A	248	254	Right-handed alpha
Helix 6	AA6	A	254	267	Right-handed alpha
Helix 7	AA7	A	271	293	Right-handed alpha
Helix 8	AA8	A	349	362	Right-handed alpha
Helix 9	AA9	A	365	377	Right-handed alpha
Helix 10	AB1	A	381	392	Right-handed alpha
Helix 11	AB2	A	393	418	Right-handed alpha
Helix 12	AB3	A	421	428	Right-handed alpha
Helix 13	AB4	A	429	445	Right-handed alpha
Helix 14	AB5	A	517	522	Right-handed alpha
Helix 15	AB6	A	522	542	Right-handed alpha
Helix 16	AB7	A	548	557	Right-handed alpha
Helix 17	AB8	A	557	578	Right-handed alpha
Helix 18	AB9	A	585	605	Right-handed alpha
Helix 19	AC1	A	611	622	Right-handed alpha
Helix 20	AC2	A	623	625	Right-handed 310
Helix 21	AC3	A	626	632	Right-handed alpha
Helix 22	AC4	A	635	647	Right-handed alpha
Helix 23	AC5	A	650	673	Right-handed alpha
Helix 24	AC6	A	690	704	Right-handed alpha
Helix 25	AC7	A	706	717	Right-handed alpha
Helix 26	AC8	A	722	729	Right-handed 310
Helix 27	AC9	A	730	748	Right-handed alpha
Helix 28	AD1	A	748	756	Right-handed alpha
Helix 29	AD2	A	756	761	Right-handed alpha
Helix 30	AD3	A	762	768	Right-handed alpha
Helix 31	AD4	A	879	885	Right-handed alpha
Helix 32	AD5	A	887	905	Right-handed alpha
Helix 33	AD6	A	913	940	Right-handed alpha
Helix 34	AD7	A	956	970	Right-handed alpha
Helix 35	AD8	A	980	987	Right-handed alpha
Helix 36	AD9	A	993	998	Right-handed alpha
Helix 37	AE1	A	998	1013	Right-handed alpha
Helix 38	AE2	A	1014	1016	Right-handed 310
Helix 39	AE3	A	1017	1037	Right-handed alpha
Helix 40	AE4	A	1064	1066	Right-handed 310
Helix 41	AE5	A	1086	1099	Right-handed alpha
Helix 42	AE6	A	1102	1112	Right-handed alpha
Helix 43	AE7	A	1125	1127	Right-handed 310
Helix 44	AE8	A	1128	1144	Right-handed alpha
Helix 45	AE9	A	1147	1152	Right-handed alpha
Helix 46	AF1	A	1157	1161	Right-handed 310
Helix 47	AF2	A	1171	1181	Right-handed alpha
Helix 48	AF3	A	1192	1203	Right-handed alpha
Helix 49	AF4	A	1204	1223	Right-handed alpha
Helix 50	AF5	A	1230	1260	Right-handed alpha
Helix 51	AF6	A	1267	1283	Right-handed alpha
Helix 52	AF7	A	1315	1321	Right-handed alpha
Helix 53	AF8	A	1322	1325	Right-handed 310
Helix 54	AF9	A	1326	1331	Right-handed alpha
Helix 55	AG1	A	1335	1350	Right-handed alpha
Helix 56	AG2	A	1351	1373	Right-handed alpha
Helix 57	AG3	A	1391	1404	Right-handed alpha
Helix 58	AG4	A	1407	1413	Right-handed alpha
Helix 59	AG5	A	1439	1454	Right-handed alpha
Helix 60	AG6	A	1478	1492	Right-handed alpha
Helix 61	AG7	A	1504	1511	Right-handed alpha
Helix 62	AG8	A	1522	1534	Right-handed alpha
Helix 63	AG9	A	1546	1558	Right-handed alpha
Helix 64	AH1	A	1565	1576	Right-handed alpha
Helix 65	AH2	A	1583	1588	Right-handed alpha
Helix 66	AH3	D	29	53	Right-handed alpha
Helix 67	AH4	D	53	65	Right-handed alpha
Helix 68	AH5	D	74	110	Right-handed alpha
Helix 69	AH6	D	176	186	Right-handed alpha
Helix 70	AH7	D	188	200	Right-handed alpha
Helix 71	AH8	D	237	240	Right-handed 310
Helix 72	AH9	D	241	249	Right-handed alpha
Helix 73	AI1	D	261	265	Right-handed 310
Helix 74	AI2	D	266	281	Right-handed alpha
Helix 75	AI3	D	311	323	Right-handed alpha
Helix 76	AI4	D	332	345	Right-handed alpha
Helix 77	AI5	D	369	377	Right-handed alpha
Helix 78	AI6	D	396	406	Right-handed alpha
Helix 79	AI7	D	415	417	Right-handed 310
Helix 80	AI8	D	418	423	Right-handed alpha
Helix 81	AI9	D	425	431	Right-handed alpha
Helix 82	AJ1	D	431	438	Right-handed alpha
Helix 83	AJ2	D	439	442	Right-handed 310
Helix 84	AJ3	D	494	499	Right-handed alpha
Helix 85	AJ4	D	560	565	Right-handed alpha
Helix 86	AJ5	D	568	580	Right-handed alpha
Helix 87	AJ6	D	637	647	Right-handed alpha
Helix 88	AJ7	D	648	651	Right-handed 310
Helix 89	AJ8	D	652	657	Right-handed alpha
Helix 90	AJ9	D	678	689	Right-handed alpha
Helix 91	AK1	D	699	719	Right-handed alpha
Helix 92	AK2	D	747	751	Right-handed 310
Helix 93	AK3	D	757	760	Right-handed 310
Helix 94	AK4	D	761	770	Right-handed alpha
Helix 95	AK5	D	817	827	Right-handed alpha
Helix 96	AK6	D	865	870	Right-handed alpha
Helix 97	AK7	D	874	878	Right-handed 310
Helix 98	AK8	D	879	889	Right-handed alpha
Helix 99	AK9	D	1042	1047	Right-handed alpha
Helix 100	AL1	C	39	55	Right-handed alpha
Helix 101	AL2	C	120	132	Right-handed alpha
Helix 102	AL3	C	155	159	Right-handed 310
Helix 103	AL4	C	190	208	Right-handed alpha
Helix 104	AL5	C	246	262	Right-handed alpha
Helix 105	AL6	C	276	281	Right-handed 310
Helix 106	AL7	C	296	308	Right-handed alpha
Helix 107	AL8	C	314	327	Right-handed alpha
Helix 108	AL9	C	329	333	Right-handed 310
Helix 109	AM1	C	341	361	Right-handed alpha

There are 17 sheets in PDB entry 7UHF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	303	first strand
Strand 2	A	331	333	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1058	1062	first strand
Strand 2	A	1070	1074	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1499	1500	first strand
Strand 2	A	1544	1545	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	72	first strand
Strand 2	D	629	633	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	142	144	first strand
Strand 2	D	122	126	parallel
Strand 3	D	165	167	parallel
Strand 4	D	215	218	anti-parallel
Strand 5	D	206	210	anti-parallel
Strand 6	D	484	493	anti-parallel
Strand 7	D	458	467	anti-parallel
Strand 8	D	445	446	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	142	144	first strand
Strand 2	D	122	126	parallel
Strand 3	D	165	167	parallel
Strand 4	D	215	218	anti-parallel
Strand 5	D	206	210	anti-parallel
Strand 6	D	484	493	anti-parallel
Strand 7	D	458	467	anti-parallel
Strand 8	D	450	451	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	150	151	first strand
Strand 2	D	158	159	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	298	300	first strand
Strand 2	D	291	294	anti-parallel
Strand 3	D	252	259	parallel
Strand 4	D	355	362	parallel
Strand 5	D	383	389	parallel
Strand 6	D	410	413	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	521	523	first strand
Strand 2	D	511	515	anti-parallel
Strand 3	D	617	624	anti-parallel
Strand 4	D	600	612	anti-parallel
Strand 5	D	584	593	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	658	661	first strand
Strand 2	D	740	743	anti-parallel
Strand 3	D	729	736	anti-parallel
Strand 4	D	810	816	anti-parallel
Strand 5	D	792	797	anti-parallel
Strand 6	D	774	776	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	800	801	first strand
Strand 2	D	806	807	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	859	861	first strand
Strand 2	D	849	854	anti-parallel
Strand 3	D	1013	1018	anti-parallel
Strand 4	D	1000	1007	anti-parallel
Strand 5	D	989	995	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	892	904	first strand
Strand 2	D	972	983	anti-parallel
Strand 3	D	1036	1038	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	115	119	first strand
Strand 2	C	103	108	anti-parallel
Strand 3	C	91	95	anti-parallel
Strand 4	C	62	66	anti-parallel
Strand 5	C	171	172	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	71	first strand
Strand 2	C	86	87	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	180	183	first strand
Strand 2	C	288	292	parallel
Strand 3	C	335	337	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	212	215	first strand
Strand 2	C	266	269	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UHF

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UHF