Analysis of interatomic Contacts of Structural Units in PDB entry:
7UHN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UHN entry

There is 1 chain in PDB entry 7UHN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 24ALA 287
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 7UHN. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
35 40Right-handed 310
Helix 2
AA2
A
77 79Right-handed 310
Helix 3
AA3
A
80 91Right-handed alpha
Helix 4
AA4
A
94 96Right-handed 310
Helix 5
AA5
A
107 112Right-handed alpha
Helix 6
AA6
A
113 122Right-handed alpha
Helix 7
AA7
A
128 137Right-handed alpha
Helix 8
AA8
A
222 236Right-handed alpha
Helix 9
AA9
A
246 251Right-handed 310
Helix 10
AB1
A
253 260Right-handed 310
Helix 11
AB2
A
266 287Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7UHN. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
45 46first strand
Strand 2
A
51 53anti-parallel
Strand 3
A
62 66anti-parallel
Strand 4
A
69 73anti-parallel
Strand 5
A
98 102parallel
Strand 6
A
124 127parallel
Strand 7
A
158 159parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
165 168first strand
Strand 2
A
171 177anti-parallel
Strand 3
A
186 194anti-parallel
Strand 4
A
197 203anti-parallel
Strand 5
A
241 243parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il